BLASTX nr result

ID: Salvia21_contig00035491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00035491
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   108   9e-22
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...   102   8e-20
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    91   3e-16
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    90   4e-16
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    88   2e-15

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  108 bits (271), Expect = 9e-22
 Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 2/210 (0%)
 Frame = -2

Query: 686 IWRDRNNVVWREIFPNPNHSVALAADCRKDWLMAKSQRDRQTTTTSVAAAP--CRGWHLL 513
           IWR RN+ VW       N +V LA +    W     Q  R + TT V  +P     W   
Sbjct: 6   IWRRRNDKVWDGQLQPSNIAVQLARELLFQW-----QAARNSATTQVQQSPQDTIAWQPP 60

Query: 512 PEGSIHCSVDAAFFAEEESMGLGLILRDHSGDFISGMSIKMPGKRSVEEAELMGIKEALS 333
             G + C+VDAA F+E+   G G+ +RD  G F+   +    G    +EAE +G+++A+ 
Sbjct: 61  AAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAIL 120

Query: 332 WIKRLGFMEGVVASDSKRVCDALGDGRRNISEFGTIVAFCRDELMTLPGFRVRHVRREQN 153
           W+ +L      +  D K V D++ D   N +EFG+I+  CR  L     F++  VRR+ N
Sbjct: 121 WLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQAN 180

Query: 152 AIAHGLAKAARELTTHHVWNEPPSFVVGHF 63
            +AH  A+ +       +    P  ++ HF
Sbjct: 181 VVAHSFARVSIFQPLFGLAFAKPESILEHF 210


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score =  102 bits (254), Expect = 8e-20
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
 Frame = -2

Query: 680 RDRNNVVWREIFPNPNHSVALAADCRKDWLMAKS-QRDRQTTTTSVAAAPCRGWHLLPE- 507
           + RN  +W      P  +V  A     DW  A S QR+       +    C      P+ 
Sbjct: 118 KQRNLCLWEGQLQQPAQTVFCALSFLCDWASACSLQRNGNEARVMLEVLTC----CPPQP 173

Query: 506 GSIHCSVDAAFFAEEESMGLGLILRDHSGDFISGMSIKMPGKRSVEEAELMGIKEALSWI 327
           G + C+VD A F      G G+++RD +G F+ G     PG  +V+ AE +G++EA+ W+
Sbjct: 174 GFVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWV 233

Query: 326 KRLGFMEGVVASDSKRVCDALGDGRRNISEFGTIVAFCRDELMTLPGFRVRHVRREQNAI 147
             LG    +   D+K V DA+  G  ++ EFG ++A CR  L     + V+ +R++ N +
Sbjct: 234 LSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLV 293

Query: 146 AHGLAKAARELTTHHVWNEPPSFV 75
           AH LA+A+      ++++ PP  +
Sbjct: 294 AHSLARASHLQDGFNMFSVPPDCI 317


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 55/173 (31%), Positives = 86/173 (49%)
 Frame = -2

Query: 602 KDWLMAKSQRDRQTTTTSVAAAPCRGWHLLPEGSIHCSVDAAFFAEEESMGLGLILRDHS 423
           KDWL A+   D++ +  +        W     G + C+VDA  F++ +++GLG+ILR+  
Sbjct: 332 KDWLDARLGSDQKLSNGNANTQV--KWSKPSPGMLKCNVDAXIFSKHQTIGLGVILRNEF 389

Query: 422 GDFISGMSIKMPGKRSVEEAELMGIKEALSWIKRLGFMEGVVASDSKRVCDALGDGRRNI 243
           G      S  + G  S + AE +G++EA  W+  L     +V  D+K V D+      + 
Sbjct: 390 GSVXGCYSKVVNGVSSPKXAEALGLREAARWLLELRVSNVIVELDAKGVYDSFYSKALDR 449

Query: 242 SEFGTIVAFCRDELMTLPGFRVRHVRREQNAIAHGLAKAARELTTHHVWNEPP 84
           SEFG ++  CR  L     F + HV+R+ NA A  LAKA     +   W + P
Sbjct: 450 SEFGMLIQDCR-SLFLDQNFTLCHVKRQANAAADALAKATSSFASPSFWRDAP 501


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
 Frame = -2

Query: 686  IWRDRNNVVWREIFPNPNHSVALAADCRKDWLMAKSQRDRQTTTTSVAAAPCRGWHLLPE 507
            +W  RN+VVW     +    V       + W  A        T  S ++     W     
Sbjct: 614  LWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLATAVTVPSYSSK----WQKPDY 669

Query: 506  GSIHCSVDAAFFAEEESMGLGLILRDHSGDFISGMSIKMPGKRSVEEAELMGIKEALSWI 327
            G I  +VD A F ++ +  +G + RDH G F+ G +   P +   +  E +G++E LSWI
Sbjct: 670  GWIKINVDGAVFPDKGA--IGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWI 727

Query: 326  KRLGFMEGVVASDSKRVCDALGDGRRNISEFGTIVAFCRDELMTLPGFRVRHVRREQNAI 147
                    VV +D  RV  A+       + FG I+  C D L  L   +V + RR  N+ 
Sbjct: 728  HERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSA 787

Query: 146  AHGLAKAARELTTHHVWN-EPPSFVVGHFH 60
            AH LA  A   T+ H+W   PP  ++   H
Sbjct: 788  AHCLANGACSFTSLHIWGYTPPQCILSCLH 817


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
 Frame = -2

Query: 686  IWRDRNNVVWREIFPNPNHSVALAADCRKDWLMAKSQRDRQTTTTSVAAAPCRGWHLLPE 507
            IW+ RN+ +WR      N  +  AA            RDR     +        W    E
Sbjct: 1527 IWKQRNDCIWR------NEVMTTAA-----------VRDRGLNLLTGWQNAQDIWRKPDE 1569

Query: 506  GSIHCSVDAAFFAEEESMGLGLILRDHSGDFISGMSIKMPGKRSVEEAELMGIKEALSWI 327
            G   C+VDAAFF E   +G+G+ +RD SG  +   +        V E E +G+  A+ W 
Sbjct: 1570 GHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWA 1629

Query: 326  KRLGFMEGVVASDSKRVCDALGDGRRNISEFGTIVAFCRDELMT-LPGFRVRHVRREQNA 150
            K           DSKRV  +  + R ++S+ G I+  CR    +     RV  +RR+ N 
Sbjct: 1630 KEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFIRRQANE 1689

Query: 149  IAHGLAKAARELTTHHVWNEPPSFV 75
            + H LA+AA    + H +   P  +
Sbjct: 1690 VVHSLARAATFYASIHYFTVLPDCI 1714


Top