BLASTX nr result

ID: Salvia21_contig00035450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00035450
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              108   6e-22
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   101   5e-20
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...    99   3e-19
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/81 (59%), Positives = 64/81 (79%)
 Frame = +3

Query: 3   ELSDIIPASMCHTLVIKLGWERHDYVQNGLVHCYASCESIESARKVFDQSSNRDVITWTA 182
           +LSD+    + H   ++LGWE +D+VQNGL+H YASC  ++SAR++FD S NRDV+TWTA
Sbjct: 125 QLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTA 184

Query: 183 VINGYLKSGELGHARELFDEM 245
           VINGY KSG++  AR+LFDEM
Sbjct: 185 VINGYAKSGQVVVARQLFDEM 205


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/81 (59%), Positives = 64/81 (79%)
 Frame = +3

Query: 3   ELSDIIPASMCHTLVIKLGWERHDYVQNGLVHCYASCESIESARKVFDQSSNRDVITWTA 182
           +LSD+    + H   ++LGWE +D+VQNGL+H YASC  ++SAR++FD S NRDV+TWTA
Sbjct: 100 QLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTA 159

Query: 183 VINGYLKSGELGHARELFDEM 245
           VINGY KSG++  AR+LFDEM
Sbjct: 160 VINGYAKSGQVVVARQLFDEM 180


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/70 (65%), Positives = 58/70 (82%)
 Frame = +3

Query: 36  HTLVIKLGWERHDYVQNGLVHCYASCESIESARKVFDQSSNRDVITWTAVINGYLKSGEL 215
           H  VIKLGWE +D+V NGL+H YA+  S+E+ARK+FD S+ RDVITWTA+INGY+KSG +
Sbjct: 131 HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHV 190

Query: 216 GHARELFDEM 245
             ARELFD+M
Sbjct: 191 EFARELFDQM 200


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/81 (56%), Positives = 63/81 (77%)
 Frame = +3

Query: 3   ELSDIIPASMCHTLVIKLGWERHDYVQNGLVHCYASCESIESARKVFDQSSNRDVITWTA 182
           +L+++     CH   IKLGWE +D+VQNGLVH +A    ++SARK+FD SSNRDVITWTA
Sbjct: 123 DLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTA 182

Query: 183 VINGYLKSGELGHARELFDEM 245
           +INGY+++G++   RELFD+M
Sbjct: 183 LINGYVRAGQVLIGRELFDKM 203


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/70 (57%), Positives = 53/70 (75%)
 Frame = +3

Query: 36  HTLVIKLGWERHDYVQNGLVHCYASCESIESARKVFDQSSNRDVITWTAVINGYLKSGEL 215
           H  V+K GWE +D+VQNGL+H YA+C  ++ AR +FD S  RDV+TWT +I+GYL SG++
Sbjct: 135 HGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQV 194

Query: 216 GHARELFDEM 245
             ARELFD M
Sbjct: 195 LIARELFDRM 204


Top