BLASTX nr result

ID: Salvia21_contig00035377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00035377
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...    83   2e-14
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...    69   4e-10
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...    65   4e-09
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot...    64   1e-08
ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-...    62   5e-08

>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852831|gb|EEE90378.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1108

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/96 (48%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
 Frame = +1

Query: 1   DNSDVPREEKQKKVRIEGRRRLCKISXXXXXXXXXXXXVISAEEASVDDIWDFDSPLQVK 180
           D    P EEK  KVRIEGRRRLCK+S            V   +++S DDI DFDSP+  K
Sbjct: 78  DFDSSPEEEKPTKVRIEGRRRLCKVSSGDDGDDASREEV--KDDSSFDDIADFDSPIPSK 135

Query: 181 KTCESSGN----EIRDILNDLSSKLEILSIEKKRIP 276
              +   N    EI+DIL+DL+S+L++LSIEKKR+P
Sbjct: 136 SVGDCGNNKGVNEIKDILSDLTSRLDLLSIEKKRVP 171


>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
 Frame = +1

Query: 16  PREEKQKKVRIEGRRRLCKISXXXXXXXXXXXXVISAEEASVDDIWDFDSPLQVKK---T 186
           P+EEK+ KV+++GRRRLCK+              ++ +E+  D++ D DSP+   +    
Sbjct: 154 PKEEKKAKVKVQGRRRLCKV------VHEDAGKSVAVDESKFDELIDLDSPIPAPRKVIQ 207

Query: 187 CESSG--NEIRDILNDLSSKLEILSIEKKRIP 276
            E SG  NEI DILN+L+SK E+LS+E+K  P
Sbjct: 208 IEESGGKNEITDILNELNSKFELLSVERKPKP 239


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/89 (46%), Positives = 49/89 (55%)
 Frame = +1

Query: 10  DVPREEKQKKVRIEGRRRLCKISXXXXXXXXXXXXVISAEEASVDDIWDFDSPLQVKKTC 189
           +   EEK  KV+++GRRRLCK+S                 E    +I DFDSP       
Sbjct: 56  EAKEEEKPVKVKLQGRRRLCKLSSNDDDENTKTGD--GFYEPKFSEISDFDSPHHCSN-- 111

Query: 190 ESSGNEIRDILNDLSSKLEILSIEKKRIP 276
            + GNEIR ILNDLSS+LE LSIE KR P
Sbjct: 112 -AGGNEIRGILNDLSSRLESLSIETKRNP 139


>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
           truncatula] gi|355524327|gb|AET04781.1| DNA excision
           repair protein ERCC-6-like protein [Medicago truncatula]
          Length = 1129

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +1

Query: 19  REEKQKKVRIEGRRRLCKISXXXXXXXXXXXXVISAEEASVD-DIWDFDSPLQVKKTC-- 189
           +EEK+ KV+++GRRRLCK +             ++ +E + D D+ DFDSP+ V K    
Sbjct: 199 KEEKKTKVKVQGRRRLCKAADKEASKS------VADDEPTFDGDLVDFDSPIPVWKNVIE 252

Query: 190 --ESSG-NEIRDILNDLSSKLEILSIEKKR 270
             ES G N+IRDILN+LSSK + LS+EK +
Sbjct: 253 IEESRGRNDIRDILNELSSKFDELSVEKTK 282


>ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
           sativus]
          Length = 565

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = +1

Query: 22  EEKQKKVRIEGRRRLCKISXXXXXXXXXXXXVISAEEASVDDIWDFDSP-----LQVKKT 186
           EEK  KV+I GRRRLCK+S                   +   I DFDSP     L V+  
Sbjct: 39  EEKPTKVKINGRRRLCKLSSREDDCLDNPEGFYF-NAPNFSGITDFDSPSPPPPLPVENR 97

Query: 187 CESSGNEIRDILNDLSSKLEILSIEKKR 270
             + G+EIRDILNDLS++LE+LS+EK+R
Sbjct: 98  V-NKGSEIRDILNDLSARLELLSVEKRR 124


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