BLASTX nr result
ID: Salvia21_contig00035272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00035272
(505 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi... 89 5e-25
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi... 87 7e-24
ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 87 3e-22
gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japo... 81 6e-21
gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indi... 81 2e-20
>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 88.6 bits (218), Expect(3) = 5e-25
Identities = 42/77 (54%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -1
Query: 436 NSVLKNPILNMYVKCDATAKAHKVFDEMLKRYVVSWNSLISGYMRLGQVRKARAMFDEMA 257
N+V++N ++ MYVKCD+ AHKVF+EM +R VSWN+LISG++RLGQ+R+ARA+F+EM
Sbjct: 151 NTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQ 210
Query: 256 G-SIVS*TAMILGYTSV 209
+I S TA++ GY +
Sbjct: 211 DKTIFSWTAIVSGYARI 227
Score = 37.4 bits (85), Expect(3) = 5e-25
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -2
Query: 204 ETLEVFRAMLVAGVRPDWVSLVAALPTCALL 112
+ LE FR M + G+ PD +SLV+ LP CA L
Sbjct: 232 DALEFFRRMQMVGIEPDEISLVSVLPACAQL 262
Score = 33.5 bits (75), Expect(3) = 5e-25
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = -3
Query: 110 LGTVELGRWIHFYAERKRVLESDQDLCV 27
LG +ELG+WIHFYA++ L +++CV
Sbjct: 262 LGALELGKWIHFYADKAGFL---RNICV 286
>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 87.4 bits (215), Expect(3) = 7e-24
Identities = 41/77 (53%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -1
Query: 436 NSVLKNPILNMYVKCDATAKAHKVFDEMLKRYVVSWNSLISGYMRLGQVRKARAMFDEMA 257
N+V++N ++ MYVKCD+ AH+VF+EM +R VSWN+LISG++RLGQ+R+ARA+F+EM
Sbjct: 151 NTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQ 210
Query: 256 G-SIVS*TAMILGYTSV 209
+I S TA++ GY +
Sbjct: 211 DKTIFSWTAIVSGYARI 227
Score = 37.0 bits (84), Expect(3) = 7e-24
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -2
Query: 204 ETLEVFRAMLVAGVRPDWVSLVAALPTCALL 112
+ LE FR M + G+ PD +SLV+ LP CA L
Sbjct: 232 DALEFFRRMQMVGIEPDEISLVSVLPDCAQL 262
Score = 31.2 bits (69), Expect(3) = 7e-24
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -3
Query: 110 LGTVELGRWIHFYAERKRVLESDQDLCV 27
LG +ELG+WIH YA++ L +++CV
Sbjct: 262 LGALELGKWIHIYADKAGFL---RNICV 286
Score = 49.7 bits (117), Expect(2) = 8e-06
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = -1
Query: 436 NSVLKNPILNMYVKCDATAKAHKVFDEMLKRYVVSWNSLISGYMRLGQVRKARAMFDEM 260
N + N ++ MY KC + + ++FD+M +R V+SW+++I G G+ R+A +F EM
Sbjct: 283 NICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEM 341
Score = 24.6 bits (52), Expect(2) = 8e-06
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 204 ETLEVFRAMLVAGVRPDWVSLVAALPTCA 118
E +E+F+ M A + P ++ V L CA
Sbjct: 333 EAIELFQEMQKAKIEPSIITFVGLLTACA 361
>ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 86.7 bits (213), Expect(3) = 3e-22
Identities = 40/77 (51%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -1
Query: 436 NSVLKNPILNMYVKCDATAKAHKVFDEMLKRYVVSWNSLISGYMRLGQVRKARAMFDEMA 257
N+V++N ++ MYVKCD+ AH+VF+EM +R VSWN+LISG++RLGQ+R+ARA+F+E+
Sbjct: 125 NTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEELQ 184
Query: 256 G-SIVS*TAMILGYTSV 209
+I S TA++ GY +
Sbjct: 185 DKTIFSWTAIVSGYARI 201
Score = 33.1 bits (74), Expect(3) = 3e-22
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3
Query: 110 LGTVELGRWIHFYAERKRVLESDQDLCV 27
LG +ELG+WIH YA++ L +D+CV
Sbjct: 236 LGALELGKWIHIYADKAGFL---RDICV 260
Score = 30.0 bits (66), Expect(3) = 3e-22
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 198 LEVFRAMLVAGVRPDWVSLVAALPTCALL 112
LE FR M + + D +SLV+ LP CA L
Sbjct: 208 LEFFRRMQMVDIELDEISLVSVLPACAQL 236
>gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 80.9 bits (198), Expect(3) = 6e-21
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = -1
Query: 436 NSVLKNPILNMYVKCDATAKAHKVFDEMLKRYVVSWNSLISGYMRLGQVRKARAMFDEMA 257
+++++N ++ MY + A AHKVFDEM +R VVSWN LIS + RLGQ+RKA A+F+ M
Sbjct: 153 SAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMP 212
Query: 256 G-SIVS*TAMILGYTSVLGDVGG 191
+IV+ TAM+ GYT+V GD G
Sbjct: 213 DKTIVTWTAMVSGYTTV-GDYPG 234
Score = 33.5 bits (75), Expect(3) = 6e-21
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 198 LEVFRAMLVAGVRPDWVSLVAALPTCALL 112
++ FR+M G PD VS+VA LP CA L
Sbjct: 236 VDAFRSMQTEGFEPDDVSIVAVLPACAQL 264
Score = 31.2 bits (69), Expect(3) = 6e-21
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3
Query: 110 LGTVELGRWIHFYAERKRVLES 45
LGT+ELGRWI+ Y +R +L S
Sbjct: 264 LGTLELGRWIYAYCKRHGMLTS 285
>gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 80.9 bits (198), Expect(3) = 2e-20
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = -1
Query: 436 NSVLKNPILNMYVKCDATAKAHKVFDEMLKRYVVSWNSLISGYMRLGQVRKARAMFDEMA 257
+++++N ++ MY + A AHKVFDEM +R VVSWN LIS + RLGQ+RKA A+F+ M
Sbjct: 153 SAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMP 212
Query: 256 G-SIVS*TAMILGYTSVLGDVGG 191
+IV+ TAM+ GYT+V GD G
Sbjct: 213 DKTIVTWTAMVSGYTTV-GDYPG 234
Score = 33.5 bits (75), Expect(3) = 2e-20
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 198 LEVFRAMLVAGVRPDWVSLVAALPTCALL 112
++ FR+M G PD VS+VA LP CA L
Sbjct: 236 VDAFRSMQTEGFEPDDVSIVAVLPACAQL 264
Score = 29.3 bits (64), Expect(3) = 2e-20
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 110 LGTVELGRWIHFYAERKRVLES 45
LG +ELGRWI+ Y +R +L S
Sbjct: 264 LGALELGRWIYAYCKRHGMLTS 285