BLASTX nr result

ID: Salvia21_contig00034989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034989
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007507122.1| photosystem I assembly protein Ycf4 (chlorop...   262   2e-68
ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chlorop...   255   3e-66
ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]...   253   9e-66
gb|ABG74742.1| YCF4 protein [Forsythia europaea]                      253   9e-66
gb|ADD30774.1| photosystem I assembly protein ycf4 [Nerium olean...   253   1e-65

>ref|YP_007507122.1| photosystem I assembly protein Ycf4 (chloroplast) [Salvia
           miltiorrhiza] gi|401879753|gb|AFQ30940.1| photosystem I
           assembly protein Ycf4 (chloroplast) [Salvia
           miltiorrhiza]
          Length = 184

 Score =  262 bits (669), Expect = 2e-68
 Identities = 127/127 (100%), Positives = 127/127 (100%)
 Frame = +3

Query: 3   FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 182
           FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP
Sbjct: 51  FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 110

Query: 183 GKNRRIFLRFLIKDIQSVRIEVKEGIFARPVLYMDIRGRGAVPLTRTDENLTPREIEQKA 362
           GKNRRIFLRFLIKDIQSVRIEVKEGIFARPVLYMDIRGRGAVPLTRTDENLTPREIEQKA
Sbjct: 111 GKNRRIFLRFLIKDIQSVRIEVKEGIFARPVLYMDIRGRGAVPLTRTDENLTPREIEQKA 170

Query: 363 AELAYFL 383
           AELAYFL
Sbjct: 171 AELAYFL 177


>ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438687615|emb|CCP47141.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688299|emb|CCP47230.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688423|emb|CCP47319.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
          Length = 184

 Score =  255 bits (651), Expect = 3e-66
 Identities = 123/127 (96%), Positives = 125/127 (98%)
 Frame = +3

Query: 3   FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 182
           FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP
Sbjct: 51  FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 110

Query: 183 GKNRRIFLRFLIKDIQSVRIEVKEGIFARPVLYMDIRGRGAVPLTRTDENLTPREIEQKA 362
           GKNRRIFLRFLIKDIQSVRIEVKEGI+AR VLYMDIRGRGA+PLTR DENLTPREIEQKA
Sbjct: 111 GKNRRIFLRFLIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRADENLTPREIEQKA 170

Query: 363 AELAYFL 383
           AELAYFL
Sbjct: 171 AELAYFL 177


>ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]
           gi|334700293|ref|YP_004563792.1| Ycf4 protein [Olea
           europaea subsp. cuspidata]
           gi|334701630|ref|YP_004564015.1| Ycf4 protein [Olea
           woodiana subsp. woodiana]
           gi|334701899|ref|YP_004564508.1| Ycf4 protein [Olea
           europaea subsp. maroccana]
           gi|365823322|ref|YP_003359370.2| Ycf4 (chloroplast)
           [Olea europaea] gi|291059264|gb|ADD72100.1| photosystem
           I assembly protein ycf4 [Olea europaea]
           gi|328795444|emb|CBR30326.1| Ycf4 protein [Olea europaea
           subsp. europaea] gi|334084412|emb|CBR23841.1| Ycf4
           protein [Olea europaea subsp. cuspidata]
           gi|334084498|emb|CBR24633.1| Ycf4 protein [Olea europaea
           subsp. europaea] gi|334084584|emb|CBR30417.1| Ycf4
           protein [Olea europaea subsp. europaea]
           gi|334084670|emb|CBS29362.1| Ycf4 protein [Olea woodiana
           subsp. woodiana] gi|334084875|emb|CBS29253.1| Ycf4
           protein [Olea europaea subsp. maroccana]
           gi|334084961|emb|CBJ04309.1| Ycf4 protein [Olea europaea
           subsp. cuspidata] gi|334085047|emb|CBR23750.1| Ycf4
           protein [Olea europaea subsp. cuspidata]
           gi|363413087|gb|ADA69937.2| Ycf4 (chloroplast) [Olea
           europaea]
          Length = 184

 Score =  253 bits (647), Expect = 9e-66
 Identities = 122/127 (96%), Positives = 125/127 (98%)
 Frame = +3

Query: 3   FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 182
           F PSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP
Sbjct: 51  FFPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 110

Query: 183 GKNRRIFLRFLIKDIQSVRIEVKEGIFARPVLYMDIRGRGAVPLTRTDENLTPREIEQKA 362
           GKNRRIFLRFLIKDIQSVRIEVKEGI+AR VLYMDIRG+GA+PLTRTDENLTPREIEQKA
Sbjct: 111 GKNRRIFLRFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENLTPREIEQKA 170

Query: 363 AELAYFL 383
           AELAYFL
Sbjct: 171 AELAYFL 177


>gb|ABG74742.1| YCF4 protein [Forsythia europaea]
          Length = 184

 Score =  253 bits (647), Expect = 9e-66
 Identities = 122/127 (96%), Positives = 125/127 (98%)
 Frame = +3

Query: 3   FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 182
           F PSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP
Sbjct: 51  FFPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 110

Query: 183 GKNRRIFLRFLIKDIQSVRIEVKEGIFARPVLYMDIRGRGAVPLTRTDENLTPREIEQKA 362
           GKNRRIFLRFLIKDIQSVRIEVKEGI+AR VLYMDIRG+GA+PLTRTDENLTPREIEQKA
Sbjct: 111 GKNRRIFLRFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENLTPREIEQKA 170

Query: 363 AELAYFL 383
           AELAYFL
Sbjct: 171 AELAYFL 177


>gb|ADD30774.1| photosystem I assembly protein ycf4 [Nerium oleander]
          Length = 184

 Score =  253 bits (646), Expect = 1e-65
 Identities = 121/127 (95%), Positives = 125/127 (98%)
 Frame = +3

Query: 3   FVPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 182
           F PSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP
Sbjct: 51  FFPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFP 110

Query: 183 GKNRRIFLRFLIKDIQSVRIEVKEGIFARPVLYMDIRGRGAVPLTRTDENLTPREIEQKA 362
           GKNRRIFLRFLIKDIQS+RIEVKEGI+AR VLYMDIRG+GA+PLTRTDENLTPREIEQKA
Sbjct: 111 GKNRRIFLRFLIKDIQSIRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENLTPREIEQKA 170

Query: 363 AELAYFL 383
           AELAYFL
Sbjct: 171 AELAYFL 177