BLASTX nr result

ID: Salvia21_contig00034967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034967
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    69   5e-10
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    69   5e-10
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    65   4e-09
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    63   2e-08
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   2e-08

>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = -2

Query: 226 GKKEVLIKAVAQAMPTFAMQCFRIP----DTIHKICMIFW*GDKEEKKCMH*AR*ERMCV 59
           G KEVLIK++AQA+P FAM  FRIP    D I +    FW GD E  + +H     RMC+
Sbjct: 605 GGKEVLIKSIAQAIPVFAMSVFRIPKKICDCISEAIARFWWGDDENHRRIHWKAWWRMCI 664

Query: 58  SKQKRGMWFMDLKILNKAL 2
            KQ+ G+ F DL   N+A+
Sbjct: 665 PKQRGGLGFRDLYCFNRAM 683


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = -2

Query: 226 GKKEVLIKAVAQAMPTFAMQCFRIP----DTIHKICMIFW*GDKEEKKCMH*AR*ERMCV 59
           G KEVLIK++AQA+P FAM  FRIP    D I +    FW GD E  + +H     RMC+
Sbjct: 605 GGKEVLIKSIAQAIPVFAMSVFRIPKKICDCISEAIARFWWGDDENHRRIHWKAWWRMCI 664

Query: 58  SKQKRGMWFMDLKILNKAL 2
            KQ+ G+ F DL   N+A+
Sbjct: 665 PKQRGGLGFRDLYCFNRAM 683


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = -2

Query: 220 KEVLIKAVAQAMPTFAMQCFRIPD----TIHKICMIFW*GDKEEKKCMH*AR*ERMCVSK 53
           +EVLIK+VAQA+PT+ M CFR+PD     I  +   FW G KEE + +H    +++C SK
Sbjct: 38  REVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWGQKEETRKIHWTSWKQLCKSK 97

Query: 52  QKRGMWFMDLKILNKAL 2
            + GM F  L+  N AL
Sbjct: 98  LRGGMGFRCLQHFNSAL 114


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = -2

Query: 220 KEVLIKAVAQAMPTFAMQCFRIPD----TIHKICMIFW*GDKEEKKCMH*AR*ERMCVSK 53
           +EVLIK+VAQA+PT+ M CFR+PD     I  +   FW   KEE + +H    +++C SK
Sbjct: 38  REVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSK 97

Query: 52  QKRGMWFMDLKILNKAL 2
            + GM F  L+  N AL
Sbjct: 98  LQGGMGFRCLQXFNSAL 114


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
 Frame = -2

Query: 220  KEVLIKAVAQAMPTFAMQCFRIP----DTIHKICMIFW*GDKEEKKCMH*AR*ERMCVSK 53
            +EVLIKAVAQA+PT+AMQCF IP    D I K+C  F+ G KEE++ +     E++ + K
Sbjct: 798  REVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPK 857

Query: 52   QKRGMWFMDLKILNKAL 2
            ++ G+   +  + N+AL
Sbjct: 858  KEGGLGIRNFDVFNRAL 874


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