BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034952
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007507143.1| RNA polymerase alpha subunit (chloroplast) [...   119   3e-25
ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [...   118   6e-25
ref|YP_514884.1| RNA polymerase alpha subunit [Solanum lycopersi...   118   6e-25
ref|YP_538881.1| RNA polymerase alpha subunit [Solanum bulbocast...   118   6e-25
ref|NP_783263.1| RNA polymerase alpha subunit [Atropa belladonna...   118   6e-25

>ref|YP_007507143.1| RNA polymerase alpha subunit (chloroplast) [Salvia miltiorrhiza]
           gi|401879773|gb|AFQ30960.1| RNA polymerase alpha subunit
           (chloroplast) [Salvia miltiorrhiza]
          Length = 335

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEG 2
           MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEG
Sbjct: 1   MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEG 59


>ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [Tectona grandis]
           gi|438687635|emb|CCP47162.1| RNA polymerase alpha
           subunit (chloroplast) [Tectona grandis]
           gi|438688319|emb|CCP47251.1| RNA polymerase alpha
           subunit (chloroplast) [Tectona grandis]
           gi|438688443|emb|CCP47340.1| RNA polymerase alpha
           subunit (chloroplast) [Tectona grandis]
          Length = 337

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEG 2
           MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEG
Sbjct: 1   MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEG 59


>ref|YP_514884.1| RNA polymerase alpha subunit [Solanum lycopersicum]
           gi|109900622|sp|Q2MI69.1|RPOA_SOLLC RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|84372014|gb|ABC56331.1| RNA polymerase alpha subunit
           [Solanum lycopersicum] gi|89241703|emb|CAJ32426.1| RNA
           polymerase alpha chain [Solanum lycopersicum]
          Length = 337

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEG 2
           MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEG
Sbjct: 1   MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEG 59


>ref|YP_538881.1| RNA polymerase alpha subunit [Solanum bulbocastanum]
           gi|108773161|ref|YP_635671.1| RNA polymerase alpha
           subunit [Solanum tuberosum]
           gi|90110868|sp|Q2VEE8.1|RPOA_SOLTU RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|109900624|sp|Q2MIF6.1|RPOA_SOLBU RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|82754657|gb|ABB90071.1| RNA polymerase alpha chain
           [Solanum tuberosum] gi|84371926|gb|ABC56244.1| RNA
           polymerase alpha subunit [Solanum bulbocastanum]
           gi|88656835|gb|ABD47088.1| RNA polymerase alpha subunit
           [Solanum tuberosum] gi|329124614|gb|AEB72171.1| RNA
           polymerase alpha subunit (chloroplast) [Solanum
           tuberosum] gi|329124701|gb|AEB72257.1| RNA polymerase
           alpha subunit (chloroplast) [Solanum tuberosum]
          Length = 337

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEG 2
           MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEG
Sbjct: 1   MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEG 59


>ref|NP_783263.1| RNA polymerase alpha subunit [Atropa belladonna]
           gi|41688712|sp|Q8S8V9.1|RPOA_ATRBE RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|20068363|emb|CAC88076.1| RNA polymerase alpha subunit
           [Atropa belladonna]
          Length = 337

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEG 2
           MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEG
Sbjct: 1   MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEG 59