BLASTX nr result

ID: Salvia21_contig00034668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034668
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1211235CL ORF 350                                                121   2e-41
ref|YP_817540.1| hypothetical chloroplast RF1 [Coffea arabica] g...   120   2e-41
ref|YP_002720024.1| Ycf1 [Nicotiana tabacum]                          120   4e-41
gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315]             120   4e-41
ref|NP_054553.1| hypothetical protein NitaCp079 [Nicotiana tabac...   120   4e-41

>prf||1211235CL ORF 350
          Length = 350

 Score =  121 bits (303), Expect(2) = 2e-41
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = +2

Query: 17  VMIFQSFLLGNLVSLCMKLINSVVVVGLYYGFLTTFSIGPSYLFVLRAQVMEEGTE*KVS 196
           VMIFQSFLLGNLVSLCMK+INSVVVVGLYYGFLTTFSIGPSYLF+LRA VMEEGTE KVS
Sbjct: 1   VMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRALVMEEGTEKKVS 60

Query: 197 ATTGFL 214
           ATTGF+
Sbjct: 61  ATTGFI 66



 Score = 73.2 bits (178), Expect(2) = 2e-41
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +1

Query: 211 FITGQLMMFISIYYAPLHLALDRPHTITVLALPYLL 318
           FITGQLMMFISIYYAPLHLAL RPHTITVLALPYLL
Sbjct: 65  FITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL 100


>ref|YP_817540.1| hypothetical chloroplast RF1 [Coffea arabica]
           gi|122153677|sp|A0A393.1|YCF1_COFAR RecName:
           Full=Putative membrane protein ycf1; Short=RF1
           gi|116242222|gb|ABJ89737.1| hypothetical chloroplast RF1
           [Coffea arabica]
          Length = 1874

 Score =  120 bits (302), Expect(2) = 2e-41
 Identities = 60/65 (92%), Positives = 64/65 (98%)
 Frame = +2

Query: 20  MIFQSFLLGNLVSLCMKLINSVVVVGLYYGFLTTFSIGPSYLFVLRAQVMEEGTE*KVSA 199
           MIFQSFLLGNLVSLCMK+INSVVVVGLYYGFLTTFSIGPSYLF+LRA+VMEEGTE KVSA
Sbjct: 1   MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSA 60

Query: 200 TTGFL 214
           TTGF+
Sbjct: 61  TTGFI 65



 Score = 73.2 bits (178), Expect(2) = 2e-41
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +1

Query: 211 FITGQLMMFISIYYAPLHLALDRPHTITVLALPYLL 318
           FITGQLMMFISIYYAPLHLAL RPHTITVLALPYLL
Sbjct: 64  FITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL 99


>ref|YP_002720024.1| Ycf1 [Nicotiana tabacum]
          Length = 1902

 Score =  120 bits (300), Expect(2) = 4e-41
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = +2

Query: 17  VMIFQSFLLGNLVSLCMKLINSVVVVGLYYGFLTTFSIGPSYLFVLRAQVMEEGTE*KVS 196
           +MIFQSFLLGNLVSLCMK+INSVVVVGLYYGFLTTFSIGPSYLF+LRA VMEEGTE KVS
Sbjct: 1   MMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRALVMEEGTEKKVS 60

Query: 197 ATTGFL 214
           ATTGF+
Sbjct: 61  ATTGFI 66



 Score = 73.2 bits (178), Expect(2) = 4e-41
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +1

Query: 211 FITGQLMMFISIYYAPLHLALDRPHTITVLALPYLL 318
           FITGQLMMFISIYYAPLHLAL RPHTITVLALPYLL
Sbjct: 65  FITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL 100


>gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315]
          Length = 1877

 Score =  120 bits (300), Expect(2) = 4e-41
 Identities = 59/65 (90%), Positives = 64/65 (98%)
 Frame = +2

Query: 20  MIFQSFLLGNLVSLCMKLINSVVVVGLYYGFLTTFSIGPSYLFVLRAQVMEEGTE*KVSA 199
           MIFQSF+LGNLVSLCMK+INSVVVVGLYYGFLTTFSIGPSYLF+LRA+VMEEGTE KVSA
Sbjct: 1   MIFQSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSA 60

Query: 200 TTGFL 214
           TTGF+
Sbjct: 61  TTGFI 65



 Score = 73.2 bits (178), Expect(2) = 4e-41
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +1

Query: 211 FITGQLMMFISIYYAPLHLALDRPHTITVLALPYLL 318
           FITGQLMMFISIYYAPLHLAL RPHTITVLALPYLL
Sbjct: 64  FITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL 99


>ref|NP_054553.1| hypothetical protein NitaCp079 [Nicotiana tabacum]
           gi|78102594|ref|YP_358733.1| hypothetical protein
           NisyCp090 [Nicotiana sylvestris] gi|82214|pir||A05212
           hypothetical protein 350 - common tobacco chloroplast
           gi|4388761|emb|CAA77394.1| hypothetical protein
           [Nicotiana tabacum] gi|77799621|dbj|BAE46710.1|
           hypothetical protein [Nicotiana sylvestris]
          Length = 350

 Score =  120 bits (300), Expect(2) = 4e-41
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = +2

Query: 17  VMIFQSFLLGNLVSLCMKLINSVVVVGLYYGFLTTFSIGPSYLFVLRAQVMEEGTE*KVS 196
           +MIFQSFLLGNLVSLCMK+INSVVVVGLYYGFLTTFSIGPSYLF+LRA VMEEGTE KVS
Sbjct: 1   MMIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRALVMEEGTEKKVS 60

Query: 197 ATTGFL 214
           ATTGF+
Sbjct: 61  ATTGFI 66



 Score = 73.2 bits (178), Expect(2) = 4e-41
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +1

Query: 211 FITGQLMMFISIYYAPLHLALDRPHTITVLALPYLL 318
           FITGQLMMFISIYYAPLHLAL RPHTITVLALPYLL
Sbjct: 65  FITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL 100


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