BLASTX nr result

ID: Salvia21_contig00034657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034657
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...   209   2e-52
ref|XP_002530515.1| pentatricopeptide repeat-containing protein,...   194   6e-48
ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...   192   3e-47
ref|NP_198573.1| pentatricopeptide repeat-containing protein [Ar...   186   1e-45

>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  209 bits (531), Expect = 2e-52
 Identities = 101/151 (66%), Positives = 125/151 (82%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKNDVT 274
           SLID YGKCGEI CARKVF EM  RN VSWTAM+AG  +  D+  ARK+FDEMP+KN V+
Sbjct: 163 SLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVS 222

Query: 273 WNAMIKGLVKFGDLVSAKKVFDEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDL 94
           WNA+I G VK GDL SA+K+FDEMP R+VVSFTT+I GYAK+GDMA+AR +F++ P +D+
Sbjct: 223 WNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDV 282

Query: 93  VSWSALMSGYVQNGKPGEAVKVFGEMWAMNL 1
           V+WSAL+SGYVQNG+P EAVK+F EM + N+
Sbjct: 283 VAWSALISGYVQNGQPNEAVKIFLEMCSRNV 313



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 44/190 (23%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKN--- 283
           ++ID Y K G++  AR VF E P R+ V+W+A+++G +  G    A K+F EM  +N   
Sbjct: 256 TMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKP 315

Query: 282 ---------------------------------DVTWNAMIKGLV----KFGDLVSAKKV 214
                                            DV    +I  L+    K G +  A K+
Sbjct: 316 DEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKL 375

Query: 213 FDEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDL----VSWSALMSGYVQNGKP 46
           F+EMP RD++S+ +++ G +  G    A S+F +M ++ L    V+++ +++   + G  
Sbjct: 376 FEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLV 435

Query: 45  GEAVKVFGEM 16
            E    F  M
Sbjct: 436 DEGCYYFESM 445


>ref|XP_002530515.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529919|gb|EEF31847.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 359

 Score =  194 bits (493), Expect = 6e-48
 Identities = 91/151 (60%), Positives = 119/151 (78%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKNDVT 274
           SL+DFYGKC EI  ARK+F EM  +N VSWTAM+ G LN GD+  A ++FD+MP++N  +
Sbjct: 52  SLVDFYGKCKEILSARKMFDEMTQKNVVSWTAMVVGYLNVGDLGNAERLFDQMPERNLKS 111

Query: 273 WNAMIKGLVKFGDLVSAKKVFDEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDL 94
           WNAMI G VK GDL+ A+KVFDEMP R+VVSFT +I GYAKAGDM  AR +F++ P +D+
Sbjct: 112 WNAMIDGWVKAGDLLLARKVFDEMPERNVVSFTVMIDGYAKAGDMTTARDLFERAPKRDV 171

Query: 93  VSWSALMSGYVQNGKPGEAVKVFGEMWAMNL 1
           ++WSAL+SGY QNG+P EAV++F EM + N+
Sbjct: 172 IAWSALISGYAQNGQPNEAVRIFLEMESKNV 202



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 40/186 (21%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKNDVT 274
           ++ID + K G++  ARKVF EMP RN VS+T M+ G    GD+  AR +F+  PK++ + 
Sbjct: 114 AMIDGWVKAGDLLLARKVFDEMPERNVVSFTVMIDGYAKAGDMTTARDLFERAPKRDVIA 173

Query: 273 WNAMIKGLVKFGDLVSAKKVFDEMPVRDVVS----------------------------- 181
           W+A+I G  + G    A ++F EM  ++V                               
Sbjct: 174 WSALISGYAQNGQPNEAVRIFLEMESKNVKPDEYIMVSLMSACSQLGSLDLARWADCYLS 233

Query: 180 -----------FTTLIGGYAKAGDMAAARSMFDQMPSKDLVSWSALMSGYVQNGKPGEAV 34
                         LI   AK G+M  A+ +F++MP +DL+++ +++ G   +G   +AV
Sbjct: 234 KSSIDIGQTHVIAALIDMNAKCGNMERAKKLFEEMPKRDLITYCSMIQGLSIHGCAEQAV 293

Query: 33  KVFGEM 16
            +F  M
Sbjct: 294 GLFNRM 299



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 40/160 (25%)
 Frame = -2

Query: 450 LIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKN---- 283
           +ID Y K G++  AR +F   P R+ ++W+A+++G    G    A ++F EM  KN    
Sbjct: 146 MIDGYAKAGDMTTARDLFERAPKRDVIAWSALISGYAQNGQPNEAVRIFLEMESKNVKPD 205

Query: 282 --------------------------------DVTWNAMIKGLV----KFGDLVSAKKVF 211
                                           D+    +I  L+    K G++  AKK+F
Sbjct: 206 EYIMVSLMSACSQLGSLDLARWADCYLSKSSIDIGQTHVIAALIDMNAKCGNMERAKKLF 265

Query: 210 DEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDLV 91
           +EMP RD++++ ++I G +  G    A  +F++M ++ L+
Sbjct: 266 EEMPKRDLITYCSMIQGLSIHGCAEQAVGLFNRMLNESLI 305


>ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|222855384|gb|EEE92931.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  193 bits (491), Expect = 1e-47
 Identities = 94/151 (62%), Positives = 120/151 (79%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKNDVT 274
           SLI FYGKC EI  ARKVF E+P RN VSWTAM+AG  + GD+E A+++F+ MP++N  +
Sbjct: 145 SLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPERNLPS 204

Query: 273 WNAMIKGLVKFGDLVSAKKVFDEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDL 94
           WNAMI GL K GDL  A+KVFDEM  R+VVSFT +I GYAK GDMA+AR++FD+ P KD+
Sbjct: 205 WNAMISGLGKAGDLSGARKVFDEMVERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDV 264

Query: 93  VSWSALMSGYVQNGKPGEAVKVFGEMWAMNL 1
           V+WSAL+SGY +N +P EAVK+F EM +MN+
Sbjct: 265 VAWSALISGYSRNEQPNEAVKIFFEMVSMNV 295



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 40/186 (21%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKNDVT 274
           ++I   GK G++  ARKVF EM  RN VS+T M+ G    GD+ +AR +FDE P+K+ V 
Sbjct: 207 AMISGLGKAGDLSGARKVFDEMVERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVA 266

Query: 273 WNAMIKGLVKFGDLVSAKKVFDEM------------------------------------ 202
           W+A+I G  +      A K+F EM                                    
Sbjct: 267 WSALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLS 326

Query: 201 ----PVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDLVSWSALMSGYVQNGKPGEAV 34
                 R       LI  +AK G+M  A  +F  MPS+DL+   +L+ G   +G+  EAV
Sbjct: 327 QTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAV 386

Query: 33  KVFGEM 16
           ++F  M
Sbjct: 387 ELFNRM 392



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/90 (42%), Positives = 62/90 (68%)
 Frame = -2

Query: 270 NAMIKGLVKFGDLVSAKKVFDEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDLV 91
           +++I    K  +++SA+KVFDE+P R+VVS+T ++ GYA  GD+  A+ +F++MP ++L 
Sbjct: 144 SSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPERNLP 203

Query: 90  SWSALMSGYVQNGKPGEAVKVFGEMWAMNL 1
           SW+A++SG  + G    A KVF EM   N+
Sbjct: 204 SWNAMISGLGKAGDLSGARKVFDEMVERNV 233


>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/151 (62%), Positives = 116/151 (76%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKNDVT 274
           SLID YGKCGEI  ARKVF  M  RN VSWTAM+ G +  GD+  ARK+FDEMP +N  +
Sbjct: 168 SLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRNVAS 227

Query: 273 WNAMIKGLVKFGDLVSAKKVFDEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDL 94
           WN+M++G VK GDL  A+ VFD MP ++VVSFTT+I GYAKAGDMAAAR +FD    KD+
Sbjct: 228 WNSMLQGFVKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDV 287

Query: 93  VSWSALMSGYVQNGKPGEAVKVFGEMWAMNL 1
           V+WSAL+SGYVQNG P +A++VF EM  MN+
Sbjct: 288 VAWSALISGYVQNGLPNQALRVFLEMELMNV 318


>ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g37570 gi|9757967|dbj|BAB08303.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332006824|gb|AED94207.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 550

 Score =  186 bits (473), Expect = 1e-45
 Identities = 85/151 (56%), Positives = 115/151 (76%)
 Frame = -2

Query: 453 SLIDFYGKCGEIECARKVFAEMPVRNEVSWTAMMAGCLNCGDIEAARKMFDEMPKKNDVT 274
           S +DFYGKC ++  ARKVF EMP RN VSWTA++   +  G++E A+ MFD MP++N  +
Sbjct: 150 SFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGS 209

Query: 273 WNAMIKGLVKFGDLVSAKKVFDEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDL 94
           WNA++ GLVK GDLV+AKK+FDEMP RD++S+T++I GYAK GDM +AR +F++    D+
Sbjct: 210 WNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDV 269

Query: 93  VSWSALMSGYVQNGKPGEAVKVFGEMWAMNL 1
            +WSAL+ GY QNG+P EA KVF EM A N+
Sbjct: 270 RAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
 Frame = -2

Query: 378 NEVSWTAMMAGCLNCGDIEAARKMFDEMPK----KNDVTWNAMIKGLVKFGDLVSAKKVF 211
           +E ++  +M  C N G +     +   + +    K+ V   + +    K  DL SA+KVF
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168

Query: 210 DEMPVRDVVSFTTLIGGYAKAGDMAAARSMFDQMPSKDLVSWSALMSGYVQNGKPGEAVK 31
            EMP R+ VS+T L+  Y K+G++  A+SMFD MP ++L SW+AL+ G V++G    A K
Sbjct: 169 GEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKK 228

Query: 30  VFGEM 16
           +F EM
Sbjct: 229 LFDEM 233


Top