BLASTX nr result

ID: Salvia21_contig00034635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034635
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306264.1| chromatin remodeling complex subunit [Populu...   213   2e-53
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   212   3e-53
ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...   209   3e-52
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   202   3e-50
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   201   7e-50

>ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222855713|gb|EEE93260.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1058

 Score =  213 bits (541), Expect = 2e-53
 Identities = 116/194 (59%), Positives = 129/194 (66%), Gaps = 12/194 (6%)
 Frame = -2

Query: 546 NEPARVQAKSGSTKEFPDYSYRKEDEDNA----ALSKRPPTKKL---DGQTKFIEVSDEE 388
           NEP R   K  S       S R E ED       L+ +   KK+   D   K+  +SDE 
Sbjct: 271 NEPTRFHEKLRSVGRSSLLSLRDEPEDKGDDCEVLTSKKVVKKVGRPDAIAKYNLLSDES 330

Query: 387 SDEVTISDNHVDE-----FTLSGLRGTYKLPGKIAKMLYPHQREGLKWLWSLHCKGKGGI 223
           S    + DNH D       TL G + TYKL G IAKMLYPHQREGL+WLWSLHC+GKGGI
Sbjct: 331 S-VTDVLDNHADSEDDSCITLPGPKSTYKLSGTIAKMLYPHQREGLRWLWSLHCQGKGGI 389

Query: 222 LGDDMGLGKTMQICSYLCGLFHSNLIRRVLVVAPKTLLTHWINELSTVGLSEKTREYFAT 43
           LGDDMGLGKTMQICS+L GLFHS LI+R LVVAPKTLL+HWI ELS VGLS KTREYF T
Sbjct: 390 LGDDMGLGKTMQICSFLAGLFHSKLIKRALVVAPKTLLSHWIKELSVVGLSAKTREYFGT 449

Query: 42  CQKLRHYELQYVLQ 1
             K R YELQY+LQ
Sbjct: 450 SLKARDYELQYILQ 463


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score =  212 bits (540), Expect = 3e-53
 Identities = 104/154 (67%), Positives = 120/154 (77%)
 Frame = -2

Query: 462 AALSKRPPTKKLDGQTKFIEVSDEESDEVTISDNHVDEFTLSGLRGTYKLPGKIAKMLYP 283
           AA+S+    K+    +  ++V D+ +D   + D      TLSG R TYKLPGKIAKMLYP
Sbjct: 275 AAVSRGSKFKEEYDDSDVVDVLDDCTDGSVLEDESA--ITLSGPRSTYKLPGKIAKMLYP 332

Query: 282 HQREGLKWLWSLHCKGKGGILGDDMGLGKTMQICSYLCGLFHSNLIRRVLVVAPKTLLTH 103
           HQR+GLKWLWSLHC+GKGGILGDDMGLGKTMQIC +L GLFHS L+RR +VVAPKTLL+H
Sbjct: 333 HQRDGLKWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSCLLRRAVVVAPKTLLSH 392

Query: 102 WINELSTVGLSEKTREYFATCQKLRHYELQYVLQ 1
           WI ELS VGLSEKTREY+ TC K R YELQYVLQ
Sbjct: 393 WIKELSAVGLSEKTREYYGTCTKTRQYELQYVLQ 426


>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852831|gb|EEE90378.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1108

 Score =  209 bits (531), Expect = 3e-52
 Identities = 115/193 (59%), Positives = 128/193 (66%), Gaps = 11/193 (5%)
 Frame = -2

Query: 546 NEPARVQAKSGSTKEFPDYSYRKEDEDN----AALSKRPPTKKLD--GQTKFIEVSDEES 385
           NEP     +  S       S R E ED+      L+ +   KK+   G      V   ES
Sbjct: 294 NEPDGFNERLRSVGRSSVLSLRDESEDDEDDCVVLTGKKVVKKVGRPGAIAKYNVLSGES 353

Query: 384 DEVTISDNHVDE-----FTLSGLRGTYKLPGKIAKMLYPHQREGLKWLWSLHCKGKGGIL 220
            E  + +NH +        L GL+ TYKLPGKIAKMLYPHQ EGL+WLWSLHCKGKGGIL
Sbjct: 354 -ETAVLENHAESEDDGSIILPGLKSTYKLPGKIAKMLYPHQCEGLRWLWSLHCKGKGGIL 412

Query: 219 GDDMGLGKTMQICSYLCGLFHSNLIRRVLVVAPKTLLTHWINELSTVGLSEKTREYFATC 40
           GDDMGLGKTMQICS+L GLFHS LI+RVLVVAPKTLLTHWI ELS VGLS KTREYF T 
Sbjct: 413 GDDMGLGKTMQICSFLAGLFHSKLIKRVLVVAPKTLLTHWIKELSVVGLSGKTREYFGTS 472

Query: 39  QKLRHYELQYVLQ 1
            K R YELQY+LQ
Sbjct: 473 LKARDYELQYILQ 485


>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  202 bits (514), Expect = 3e-50
 Identities = 114/200 (57%), Positives = 128/200 (64%), Gaps = 11/200 (5%)
 Frame = -2

Query: 567 KYEMLI---NNEPARVQAKSGSTKEFPDYSYRKEDEDNAALSKRPPTKKLDGQTKFIEVS 397
           K+E+L      +P  V+   G  K   D      +  +A  S  P  + L   TK  +  
Sbjct: 227 KFELLSVERKPKPKHVEGLVGGEKNCDDDG---SEFGSAGSSFSPQQESLSEGTKNGDGD 283

Query: 396 DEESDEVTISDNHVDEF--------TLSGLRGTYKLPGKIAKMLYPHQREGLKWLWSLHC 241
           D E D    S   +D F        T +G R TYKL  KIAKMLYPHQREGLKWLWSLHC
Sbjct: 284 DIEYD-ANDSVQELDHFEPETDGSITFTGPRSTYKLQAKIAKMLYPHQREGLKWLWSLHC 342

Query: 240 KGKGGILGDDMGLGKTMQICSYLCGLFHSNLIRRVLVVAPKTLLTHWINELSTVGLSEKT 61
            GKGGILGDDMGLGKTMQ+C +L GLFHS LIRRVL+VAPKTLL HWI ELS VGLSEKT
Sbjct: 343 LGKGGILGDDMGLGKTMQMCGFLAGLFHSRLIRRVLIVAPKTLLPHWIKELSAVGLSEKT 402

Query: 60  REYFATCQKLRHYELQYVLQ 1
           REYF T  KLR YELQY+LQ
Sbjct: 403 REYFGTSTKLREYELQYILQ 422


>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
           gi|223544553|gb|EEF46070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1109

 Score =  201 bits (511), Expect = 7e-50
 Identities = 102/169 (60%), Positives = 122/169 (72%), Gaps = 10/169 (5%)
 Frame = -2

Query: 477 EDEDNAALSKRPPTK---KLDGQTKF-------IEVSDEESDEVTISDNHVDEFTLSGLR 328
           ++ED   LS++   +   KL G+ K        I++ D+++D+  + D      TLSG R
Sbjct: 331 DEEDCLVLSRKKVVEEAGKLGGKNKEPCNLSSPIDLLDDDTDDSVLDDG--GSITLSGPR 388

Query: 327 GTYKLPGKIAKMLYPHQREGLKWLWSLHCKGKGGILGDDMGLGKTMQICSYLCGLFHSNL 148
            T++LP KIA MLYPHQR+GLKWLWSLHC GKGGILGDDMGLGKTMQIC +L GLFHS L
Sbjct: 389 STFELPSKIATMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQICGFLAGLFHSRL 448

Query: 147 IRRVLVVAPKTLLTHWINELSTVGLSEKTREYFATCQKLRHYELQYVLQ 1
           I+R LVVAPKTLL HWI EL+ VGLS KTREYF T  K R YELQY+LQ
Sbjct: 449 IKRALVVAPKTLLAHWIKELAAVGLSRKTREYFGTSLKARQYELQYILQ 497


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