BLASTX nr result

ID: Salvia21_contig00034378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034378
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37137.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...    74   1e-11
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]    74   1e-11
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...    69   5e-10
ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...    68   9e-10

>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2    FKDRIPSKDLPLFKNLLKEIASLEKNPTGSYWVLKPEY 115
            FKDRIPSKDLPLFKNLLKEIA+LEK+P GS WVLKPEY
Sbjct: 1077 FKDRIPSKDLPLFKNLLKEIATLEKDPNGSSWVLKPEY 1114


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2    FKDRIPSKDLPLFKNLLKEIASLEKNPTGSYWVLKPEY 115
            FKDRIPSKDLPLFKNLLKEIA+LEK+P GS WVLKPEY
Sbjct: 1188 FKDRIPSKDLPLFKNLLKEIATLEKDPNGSSWVLKPEY 1225


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2    FKDRIPSKDLPLFKNLLKEIASLEKNPTGSYWVLKPEY 115
            FKDRIPSKDLPLFKNLLKEIA+LEK+P GS WVLKPEY
Sbjct: 1210 FKDRIPSKDLPLFKNLLKEIATLEKDPNGSSWVLKPEY 1247


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +2

Query: 2    FKDRIPSKDLPLFKNLLKEIASLEKNPTGSYWVLKPEYHDQ 124
            FKDRI  KD+PLFKNLLKEIA+LEK+P G  WVLKPEY  Q
Sbjct: 1190 FKDRILEKDMPLFKNLLKEIATLEKDPNGKVWVLKPEYRQQ 1230


>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
            max]
          Length = 1210

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +2

Query: 2    FKDRIPSKDLPLFKNLLKEIASLEKNPTGSYWVLKPEY 115
            FKDRIPSKDL LFKNLLKEIA+L K   GSYWVLKP+Y
Sbjct: 1171 FKDRIPSKDLALFKNLLKEIATLHKGSNGSYWVLKPDY 1208


Top