BLASTX nr result
ID: Salvia21_contig00034295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00034295
(410 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510888.1| pentatricopeptide repeat-containing protein,... 120 1e-25
ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi... 115 5e-24
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t... 105 3e-21
emb|CBI38215.3| unnamed protein product [Vitis vinifera] 101 5e-20
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi... 101 5e-20
>ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550003|gb|EEF51490.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 120 bits (301), Expect = 1e-25
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
Frame = +1
Query: 49 YVNKFFNLFAKPSLYIYNALIRANATKIK----DSTSCECLTLYKEMMAGGLVPDCITLP 216
Y F+ KP+L YN +IRA A+K D+ C+ L LYK+M+ + PDC+T P
Sbjct: 53 YAADIFHYIKKPNLPFYNIMIRAYASKSNVDYDDARLCQALILYKQMLCNDISPDCLTFP 112
Query: 217 FLLKECSKRFDGPTGRAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNR 396
FLLKEC++ GR IH HA+K G D++VQN+LI+ YS C + ++RK+FDEM NR
Sbjct: 113 FLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEFVSNSRKLFDEMSNR 172
Query: 397 DVVS 408
DVVS
Sbjct: 173 DVVS 176
>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 115 bits (287), Expect = 5e-24
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
Frame = +1
Query: 49 YVNKFFNLFAKPSLYIYNALIRANATKIK--DSTSCECLTLYKEMMAGGLVPDCITLPFL 222
Y F++ P L YN +IRA + D+ C+ L LYK+M +VP+C+T PFL
Sbjct: 73 YATNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFL 132
Query: 223 LKECSKRFDGPTGRAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNRDV 402
LK C++ DG TG+AIH +KFG+ DVYV N+LI+LY G+L +ARKVFDEM DV
Sbjct: 133 LKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDV 192
Query: 403 VS 408
V+
Sbjct: 193 VT 194
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/108 (30%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Frame = +1
Query: 85 SLYIYNALIRANATKIKDSTSCECLTLYKEM--MAGGLV-PDCITLPFLLKECSKRFDGP 255
++ +N++I A + ++ E L L+ EM ++ +V PD IT+ +L C++
Sbjct: 222 NIITWNSIITGLA---QGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGAID 278
Query: 256 TGRAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNRD 399
G+ +H + + G E DV + AL+N+Y +CG ++ A ++F+EMP +D
Sbjct: 279 HGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMPEKD 326
>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 541
Score = 105 bits (263), Expect = 3e-21
Identities = 55/124 (44%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
Frame = +1
Query: 49 YVNKFFNLFAKPSLYIYNALIRA-NATKIKDSTSC--ECLTLYKEMMAGGLVPDCITLPF 219
Y N F++ P L +YN +IR+ + D ++C + L LYK+M+ G+VP+ +T PF
Sbjct: 74 YANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPF 133
Query: 220 LLKECSK-RFDGPTGRAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNR 396
L+K CS+ ++ G G IH H +KFG+ DV+V N+LI+L+ G+ ++ARKVFDEM R
Sbjct: 134 LVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVR 193
Query: 397 DVVS 408
DVVS
Sbjct: 194 DVVS 197
>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 101 bits (252), Expect = 5e-20
Identities = 51/109 (46%), Positives = 70/109 (64%)
Frame = +1
Query: 82 PSLYIYNALIRANATKIKDSTSCECLTLYKEMMAGGLVPDCITLPFLLKECSKRFDGPTG 261
P+L +YNA+IR AT DS E L +YK+M++ G+VPD T+PF+LK C++ G
Sbjct: 102 PNLPLYNAIIRGLATSNNDSI--EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 159
Query: 262 RAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNRDVVS 408
+H A+K G DVYV N L+ +Y+ C V+ ARKVFD P RD+VS
Sbjct: 160 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVS 208
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/120 (26%), Positives = 61/120 (50%)
Frame = +1
Query: 49 YVNKFFNLFAKPSLYIYNALIRANATKIKDSTSCECLTLYKEMMAGGLVPDCITLPFLLK 228
+ K F ++ +N++I A K + E L ++++M G+ PD +TL +L
Sbjct: 258 FARKVFQEMPVKNVVSWNSMISGLAQKGQFK---ESLYMFRKMQRLGVKPDDVTLVAVLN 314
Query: 229 ECSKRFDGPTGRAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNRDVVS 408
C+ G+ +H + + D ++ NAL+++Y++CG ++ A VF M +DV S
Sbjct: 315 SCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYS 374
>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 101 bits (252), Expect = 5e-20
Identities = 51/109 (46%), Positives = 70/109 (64%)
Frame = +1
Query: 82 PSLYIYNALIRANATKIKDSTSCECLTLYKEMMAGGLVPDCITLPFLLKECSKRFDGPTG 261
P+L +YNA+IR AT DS E L +YK+M++ G+VPD T+PF+LK C++ G
Sbjct: 87 PNLPLYNAIIRGLATSNNDSI--EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 144
Query: 262 RAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNRDVVS 408
+H A+K G DVYV N L+ +Y+ C V+ ARKVFD P RD+VS
Sbjct: 145 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVS 193
Score = 59.3 bits (142), Expect = 3e-07
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +1
Query: 130 IKDSTSCECLTLYKEMMAGGLVPDCITLPFLLKECSKRFDGPTGRAIHVHAVKFGYEG-D 306
+K + E + L+ EM L D +TL +L C++ D GR +H + ++ D
Sbjct: 202 VKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLD 261
Query: 307 VYVQNALINLYSECGVLEDARKVFDEMPNRDVVS 408
V+V NAL+++Y +CG ARKVF EMP ++VVS
Sbjct: 262 VFVGNALVDMYLKCGDANFARKVFQEMPVKNVVS 295
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/120 (26%), Positives = 61/120 (50%)
Frame = +1
Query: 49 YVNKFFNLFAKPSLYIYNALIRANATKIKDSTSCECLTLYKEMMAGGLVPDCITLPFLLK 228
+ K F ++ +N++I A K + E L ++++M G+ PD +TL +L
Sbjct: 280 FARKVFQEMPVKNVVSWNSMISGLAQKGQFK---ESLYMFRKMQRLGVKPDDVTLVAVLN 336
Query: 229 ECSKRFDGPTGRAIHVHAVKFGYEGDVYVQNALINLYSECGVLEDARKVFDEMPNRDVVS 408
C+ G+ +H + + D ++ NAL+++Y++CG ++ A VF M +DV S
Sbjct: 337 SCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYS 396