BLASTX nr result

ID: Salvia21_contig00034291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00034291
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   128   4e-28
ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_002520617.1| pentatricopeptide repeat-containing protein,...   128   5e-28
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27

>ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|222845929|gb|EEE83476.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/127 (51%), Positives = 87/127 (68%)
 Frame = -3

Query: 436 LRQIKQCIKLRLPMEGKKLHAHVVKSGFALHGPLFSNTLIDMYGKCGCLKDALQLFDEMP 257
           L ++K C K + P+  KK+HA +VKSG     PL  NTL+D YGKC  L+DA  LFDEMP
Sbjct: 6   LHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPL-PNTLLDAYGKCNLLQDAHYLFDEMP 64

Query: 256 NRDLASWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCSALKIGE 77
            RD  SWASI T++N A LP KTL ++    + D L+PD F+YATL  ACA   +L++G+
Sbjct: 65  QRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGK 124

Query: 76  QLHAQFI 56
           Q+HA+F+
Sbjct: 125 QVHARFV 131



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
 Frame = -3

Query: 418 CIKLRLPMEGKKLHAHVVKSGFALHGPLF-SNTLIDMYGKCGCLKDALQLFDEMPNRDLA 242
           C  L +   GK++H  V+ SG+     LF SN L+DMY KC  +  A  +F+ M +RD+ 
Sbjct: 247 CANLAVLGLGKQIHGLVIGSGY--ESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVV 304

Query: 241 SWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCSALKIGEQLHAQ 62
           SW SI          K+ L LY   V  + ++P++  +  L  AC+    +  G +L   
Sbjct: 305 SWTSIIVGAAQHGRAKEALDLYDQMVLAE-IKPNEVTFVGLIYACSHAGLVSKGRKLFKA 363

Query: 61  FI 56
            I
Sbjct: 364 MI 365


>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/133 (44%), Positives = 89/133 (66%)
 Frame = -3

Query: 454 MNHFEILRQIKQCIKLRLPMEGKKLHAHVVKSGFALHGPLFSNTLIDMYGKCGCLKDALQ 275
           MN    L Q++ C + +      +LH+ ++K+GF     L SNTL+D+YGKCG +  ALQ
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFD-KSSLLSNTLLDVYGKCGLIPQALQ 59

Query: 274 LFDEMPNRDLASWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCS 95
           LFDEMPNRD  SWASI T+HN A +P++TL + +   + D L+PD F++A +  AC+   
Sbjct: 60  LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG 119

Query: 94  ALKIGEQLHAQFI 56
            L++G+Q+HA+F+
Sbjct: 120 YLRLGKQVHARFM 132



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = -3

Query: 418 CIKLRLPMEGKKLHAHVVKSGFALHGPLF-SNTLIDMYGKCGCLKDALQLFDEMPNRDLA 242
           C  L L   GK++H  V+  GF     LF SN L+DMY KC  +  A  +F  MP +D+ 
Sbjct: 248 CANLALLELGKQIHGLVIALGF--ESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 241 SWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCSALKIGEQL 71
           SW SI          ++ L LY + V    ++P++  +  L  AC+    +  G +L
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMV-LSRIKPNEVTFVGLLYACSHAGLVSRGREL 361


>ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/133 (44%), Positives = 89/133 (66%)
 Frame = -3

Query: 454 MNHFEILRQIKQCIKLRLPMEGKKLHAHVVKSGFALHGPLFSNTLIDMYGKCGCLKDALQ 275
           MN    L Q++ C + +      +LH+ ++K+GF     L SNTL+D+YGKCG +  ALQ
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFD-KSSLLSNTLLDVYGKCGLIPQALQ 59

Query: 274 LFDEMPNRDLASWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCS 95
           LFDEMPNRD  SWASI T+HN A +P++TL + +   + D L+PD F++A +  AC+   
Sbjct: 60  LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG 119

Query: 94  ALKIGEQLHAQFI 56
            L++G+Q+HA+F+
Sbjct: 120 YLRLGKQVHARFM 132



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = -3

Query: 418 CIKLRLPMEGKKLHAHVVKSGFALHGPLF-SNTLIDMYGKCGCLKDALQLFDEMPNRDLA 242
           C  L L   GK++H  V+  GF     LF SN L+DMY KC  +  A  +F  MP +D+ 
Sbjct: 248 CANLALLELGKQIHGLVIALGF--ESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 241 SWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCSALKIGEQL 71
           SW SI          ++ L LY + V    ++P++  +  L  AC+    +  G +L
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMV-LSRIKPNEVTFVGLLYACSHAGLVSRGREL 361


>ref|XP_002520617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540178|gb|EEF41753.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 344

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/127 (49%), Positives = 84/127 (66%)
 Frame = -3

Query: 436 LRQIKQCIKLRLPMEGKKLHAHVVKSGFALHGPLFSNTLIDMYGKCGCLKDALQLFDEMP 257
           L Q++ C K + P+  KKLHA ++K       PL  NTL++ YGKCG L+DA  LF+EMP
Sbjct: 7   LHQLQLCGKRQTPLTAKKLHAQIIKLSLKESEPL-PNTLLNAYGKCGLLQDAYFLFEEMP 65

Query: 256 NRDLASWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCSALKIGE 77
            RD  SWASI T++N ANLP KTL ++      D L PD F+YATL  ACA   A++ G+
Sbjct: 66  QRDHVSWASILTAYNLANLPNKTLSIFPTMFIVDKLEPDHFVYATLVKACASLCAVRQGK 125

Query: 76  QLHAQFI 56
           Q+HA+F+
Sbjct: 126 QVHARFV 132



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 31/163 (19%)
 Frame = -3

Query: 451 NHFEILRQIKQCIKLRLPMEGKKLHAHVVKSGFALHGPLFSNTLIDMYGKCGCLKDALQL 272
           +HF     +K C  L    +GK++HA  V S F+    +  ++LIDMY KCG  K A  +
Sbjct: 104 DHFVYATLVKACASLCAVRQGKQVHARFVLSPFS-DDDVVKSSLIDMYAKCGLPKIARAV 162

Query: 271 FDEMPNRDLASWASIFTSHNHANLPKKTLFLYSDAVSKD--------------------- 155
           FD +  ++  SW ++ + +  + L  + + L+S    K+                     
Sbjct: 163 FDSILAKNAVSWTAMISGYAKSGLKVEAMELFSSFPVKNLYSWTALISGLVQSGKGIDGC 222

Query: 154 ----NLRP------DDFIYATLFNACAGCSALKIGEQLHAQFI 56
                +R       D  + +++  ACA  + L+ G+QLH   I
Sbjct: 223 YLFLEMRREGIDIIDPLVLSSVVGACANLAVLEFGKQLHGLII 265



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = -3

Query: 418 CIKLRLPMEGKKLHAHVVKSGFALHGPLF-SNTLIDMYGKCGCLKDALQLFDEMPNRDLA 242
           C  L +   GK+LH  ++  G+     LF SN L+DMY KC  +  A ++FD M  +D+ 
Sbjct: 248 CANLAVLEFGKQLHGLIIALGY--ESCLFISNALVDMYAKCSDILAAKEIFDRMIYKDVV 305

Query: 241 SWASIFTSHNHANLPKKTLFLYSDAV 164
           SW SI          K+ L LY D V
Sbjct: 306 SWTSIIVGAAQHGRAKEALDLYDDMV 331


>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/133 (45%), Positives = 90/133 (67%)
 Frame = -3

Query: 454 MNHFEILRQIKQCIKLRLPMEGKKLHAHVVKSGFALHGPLFSNTLIDMYGKCGCLKDALQ 275
           M +  ++ Q++ C + + P  GKKLH H++K+G      L SN LI+MYGKCG ++DAL 
Sbjct: 1   MCYSHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSL-SNNLINMYGKCGLIQDALN 59

Query: 274 LFDEMPNRDLASWASIFTSHNHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACAGCS 95
           LF+++P+RD  SWASI T++N ANLP  TL ++     +D L+PD +++A L  ACA   
Sbjct: 60  LFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILG 119

Query: 94  ALKIGEQLHAQFI 56
           A+K G+Q+HA FI
Sbjct: 120 AMKQGKQVHATFI 132



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = -3

Query: 391 GKKLHAHVVKSGFALHGPLF-SNTLIDMYGKCGCLKDALQLFDEMPNRDLASWASIFTSH 215
           GK++H  V+  G+     LF SN L+DMY KC  +  A ++F  M  RD+ SW SI    
Sbjct: 257 GKQIHCLVILLGY--ESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGT 314

Query: 214 NHANLPKKTLFLYSDAVSKDNLRPDDFIYATLFNACA 104
               L ++ L LY+  +S   L+P++  +  L  AC+
Sbjct: 315 AQHGLAEEALSLYNRMLS-TGLKPNEVTFVGLIYACS 350


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