BLASTX nr result

ID: Salvia21_contig00033782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00033782
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...    73   3e-11
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar...    71   1e-10
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]            71   1e-10

>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/71 (47%), Positives = 51/71 (71%)
 Frame = +1

Query: 100 KFSFSSTPLPPPEWVQPFTDLSDVISAAAKSDRQTSPWVPKVHHLLLQNTNFEQDLSLFC 279
           +F F++T LPPPEW++PF D+SDVIS++   D   SPWV ++ +LL  ++N E +L  FC
Sbjct: 48  RFVFTNTLLPPPEWIEPFVDVSDVISSSQPLD--PSPWVAQILNLLDGSSNMEHNLDSFC 105

Query: 280 DKYLIRLPPNF 312
            K+ ++L PNF
Sbjct: 106 RKFFVKLSPNF 116


>ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/71 (47%), Positives = 51/71 (71%)
 Frame = +1

Query: 100 KFSFSSTPLPPPEWVQPFTDLSDVISAAAKSDRQTSPWVPKVHHLLLQNTNFEQDLSLFC 279
           +F F++T LPPPEW++PF D+SDVIS++   D   SPWV ++ +LL  ++N E +L  FC
Sbjct: 46  RFVFTNTLLPPPEWIEPFVDVSDVISSSQPLD--PSPWVAQILNLLDGSSNMEHNLDSFC 103

Query: 280 DKYLIRLPPNF 312
            K+ ++L PNF
Sbjct: 104 RKFFVKLSPNF 114


>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = +1

Query: 97  VKFSFSSTPLPPPEWVQPFTDLSDVISAAAKSDR--QTSPWVPKVHHLLLQNTNFEQDLS 270
           V++ F+S+ LPPPEW++PF D+SD++    KS+R  Q SPWV ++ +LL  + + E +L 
Sbjct: 49  VRWVFNSSSLPPPEWIEPFNDVSDLV----KSNRNLQPSPWVSQILNLLDGSASMESNLD 104

Query: 271 LFCDKYLIRLPPNF 312
            FC K+LI+L PNF
Sbjct: 105 GFCRKFLIKLSPNF 118


>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
           gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
           [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = +1

Query: 97  VKFSFSSTPLPPPEWVQPFTDLSDVISAAAKSDRQ--TSPWVPKVHHLLLQNTNFEQDLS 270
           V++ F+S+ LPPPEW++PF D+SD++    KS+R    SPWV ++ +LL  + + E +L 
Sbjct: 49  VRWVFNSSSLPPPEWIEPFNDVSDLV----KSNRNLLPSPWVSQILNLLDGSASMESNLD 104

Query: 271 LFCDKYLIRLPPNF 312
            FC K+LI+L PNF
Sbjct: 105 GFCRKFLIKLSPNF 118


>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = +1

Query: 97  VKFSFSSTPLPPPEWVQPFTDLSDVISAAAKSDRQ--TSPWVPKVHHLLLQNTNFEQDLS 270
           V++ F+S+ LPPPEW++PF D+SD++    KS+R    SPWV ++ +LL  + + E +L 
Sbjct: 31  VRWVFNSSSLPPPEWIEPFNDVSDLV----KSNRNLLPSPWVSQILNLLDGSASMESNLD 86

Query: 271 LFCDKYLIRLPPNF 312
            FC K+LI+L PNF
Sbjct: 87  GFCRKFLIKLSPNF 100


Top