BLASTX nr result

ID: Salvia21_contig00033754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00033754
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   102   5e-20
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...    91   1e-16
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09

>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  102 bits (253), Expect = 5e-20
 Identities = 50/83 (60%), Positives = 61/83 (73%)
 Frame = +3

Query: 3   IDLEPHNHAYYIILCDLYAKAGRFDDQKRIRSMMKGLNVRKTVPGSSMIEVDGFVYEFSV 182
           IDLEPHNHA+Y+  CD+YAKAG FD  KRIR++MK   + K +PG SMIE++G V EFS 
Sbjct: 457 IDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKIPGCSMIEINGEVQEFSA 516

Query: 183 KGSPEMPIAALQSVLLLLSNEMK 251
            GS E+P+  L  VL  LSNEMK
Sbjct: 517 GGSSELPMKELVLVLNGLSNEMK 539


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = +3

Query: 3   IDLEPHNHAYYIILCDLYAKAGRFDDQKRIRSMMKGLNVRKTVPGSSMIEVDGFVYEFSV 182
           IDLEPHNHA+YI LCD+Y KAG++D  KRIR+ MK   +   +PG S+IE++G V EFSV
Sbjct: 461 IDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSV 520

Query: 183 KGSPEMPIAALQSVLLLLSNEMK 251
               E+P+  L  VL  L NEMK
Sbjct: 521 ---GEIPMKELPLVLDRLRNEMK 540


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 32/88 (36%), Positives = 54/88 (61%)
 Frame = +3

Query: 3   IDLEPHNHAYYIILCDLYAKAGRFDDQKRIRSMMKGLNVRKTVPGSSMIEVDGFVYEFSV 182
           ++LEP N   Y++L ++YAK GRFDD  +IR +MK   + KTVPG S+++++G V+EF +
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGI-KTVPGVSIVDLNGTVHEFKM 548

Query: 183 KGSPEMPIAALQSVLLLLSNEMKRDGHS 266
                  +  +   L ++   ++  GHS
Sbjct: 549 GDGSHPQMKEIYRKLKIIKERLQMAGHS 576


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 32/88 (36%), Positives = 54/88 (61%)
 Frame = +3

Query: 3   IDLEPHNHAYYIILCDLYAKAGRFDDQKRIRSMMKGLNVRKTVPGSSMIEVDGFVYEFSV 182
           ++LEP N   Y++L ++YAK GRFDD  +IR +MK   + KTVPG S+++++G V+EF +
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGI-KTVPGVSIVDLNGTVHEFKM 548

Query: 183 KGSPEMPIAALQSVLLLLSNEMKRDGHS 266
                  +  +   L ++   ++  GHS
Sbjct: 549 GDGSHPQMKEIYRKLKIIKERLQMAGHS 576


>ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 500

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/83 (40%), Positives = 52/83 (62%)
 Frame = +3

Query: 3   IDLEPHNHAYYIILCDLYAKAGRFDDQKRIRSMMKGLNVRKTVPGSSMIEVDGFVYEFSV 182
           I+LEPHN   YI+L ++YA+  R+DD  ++R  MK   +R  VPG+S IEVDG V+EF+ 
Sbjct: 398 IELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLR-NVPGASSIEVDGMVHEFTS 456

Query: 183 KGSPEMPIAALQSVLLLLSNEMK 251
           +      +  +  VL  ++ +MK
Sbjct: 457 RDGSHPCLHKICKVLCEITTDMK 479


Top