BLASTX nr result

ID: Salvia21_contig00033426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00033426
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arab...    72   4e-11
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...    72   6e-11
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...    71   8e-11
dbj|BAC42424.1| putative DNA mismatch repair protein PMS1 [Arabi...    70   1e-10
gb|AAC19275.1| T14P8.6 [Arabidopsis thaliana] gi|7269006|emb|CAB...    70   1e-10

>ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp.
           lyrata] gi|297318672|gb|EFH49094.1| hypothetical protein
           ARALYDRAFT_490319 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/56 (69%), Positives = 43/56 (76%)
 Frame = +3

Query: 276 GVLPPLPTITVMEVGTQKSPVIRPINKCVVHRICAGQVILDLSSAVKELVENSLDA 443
           G L P PT T        SP+IRPIN+ V+HRIC+GQVILDLSSAVKELVENSLDA
Sbjct: 3   GDLSPSPTTT-------SSPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDA 51


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
           gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
           repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/46 (82%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +3

Query: 309 MEVGTQ-KSPVIRPINKCVVHRICAGQVILDLSSAVKELVENSLDA 443
           MEVG    SP I+PINK +VHRICAGQVILDLSSAVKELVENSLDA
Sbjct: 1   MEVGLAVDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDA 46


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +3

Query: 330 SPVIRPINKCVVHRICAGQVILDLSSAVKELVENSLDA 443
           SP+I+PINK VVHRICAGQVILDLSSAVKELVENSLDA
Sbjct: 6   SPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDA 43


>dbj|BAC42424.1| putative DNA mismatch repair protein PMS1 [Arabidopsis thaliana]
          Length = 733

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = +3

Query: 321 TQKSPVIRPINKCVVHRICAGQVILDLSSAVKELVENSLDA 443
           T  SP+IRPIN+ V+HRIC+GQVILDLSSAVKELVENSLDA
Sbjct: 11  TTSSPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDA 51


>gb|AAC19275.1| T14P8.6 [Arabidopsis thaliana] gi|7269006|emb|CAB80739.1| AT4g02460
           [Arabidopsis thaliana]
          Length = 779

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = +3

Query: 321 TQKSPVIRPINKCVVHRICAGQVILDLSSAVKELVENSLDA 443
           T  SP+IRPIN+ V+HRIC+GQVILDLSSAVKELVENSLDA
Sbjct: 11  TTSSPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDA 51


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