BLASTX nr result

ID: Salvia21_contig00033290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00033290
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...    64   1e-08
ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
ref|XP_002529336.1| pentatricopeptide repeat-containing protein,...    60   2e-07

>ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|222860516|gb|EEE98063.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
 Frame = +2

Query: 2   PDVVTYRTLFDGFCDVKKFKEAASILDEMNFVGYAHHTCSASKYVDXXXXXXXXXXXXYM 181
           PDVV+YR LFDGFC+  +FKEAA ILDEM F G+   + S  K+V+              
Sbjct: 359 PDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCEGKNEDLLRSA 418

Query: 182 FMLVKRNSLDRY-MWRLVICLLCKDGSL-DAHELFDGLIN 295
           F  +++  L    +WR+ + ++ KD  L  +  L D LI+
Sbjct: 419 FNTLEKGKLVNVDLWRMAVAMVFKDDKLSSSFNLVDSLID 458


>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2   PDVVTYRTLFDGFCDVKKFKEAASILDEMNFVGYAHHTCSASKYVDXXXXXXXXXXXXYM 181
           PDV +YR LFDG C+  +F EAA ILDEM F GYA  + S +K+V+             +
Sbjct: 357 PDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKV 416

Query: 182 F-MLVKRNSLDRYMWRLVICLLCKDGSL-DAHELFD 283
              LVK N +D   W L +  +CK   L +  EL D
Sbjct: 417 LNSLVKGNVIDGDAWSLAVSKVCKKEKLSNGSELVD 452


>ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 394

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   PDVVTYRTLFDGFCDVKKFKEAASILDEMNFVGYAHHTCSASKYVDXXXXXXXXXXXXYM 181
           PDV++YR +FDG C++ + KEA SILDEM F GY     S +K VD             +
Sbjct: 296 PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMI 355

Query: 182 F-MLVKRNSLDRYMWRLVICLLCKDGSLDAHELFDGLIN 295
              L + N ++  MW  V+  + K+   ++  L D LI+
Sbjct: 356 LNSLGRGNRMNMDMWARVVAFVYKENLSESSNLIDSLIS 394


>ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 527

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   PDVVTYRTLFDGFCDVKKFKEAASILDEMNFVGYAHHTCSASKYVDXXXXXXXXXXXXYM 181
           PDV++YR +FDG C++ + KEA SILDEM F GY     S +K VD             +
Sbjct: 429 PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMI 488

Query: 182 F-MLVKRNSLDRYMWRLVICLLCKDGSLDAHELFDGLIN 295
              L + N ++  MW  V+  + K+   ++  L D LI+
Sbjct: 489 LNSLGRGNRMNMDMWARVVAFVYKENLSESSNLIDSLIS 527


>ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531207|gb|EEF33053.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 610

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   PDVVTYRTLFDGFCDVKKFKEAASILDEMNFVGYAHHTCSASKYVDXXXXXXXXXXXXYM 181
           PDVV+YR +FDG  D  +FK+AA ILDEM F G+A  + S  K+++             +
Sbjct: 361 PDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNGDEDLVWSV 420

Query: 182 F-MLVKRNSLDRYMWRLVICLLCKDGSLDA 268
              L K N++D  +W++ I +  K+  L +
Sbjct: 421 LNCLGKINAIDTELWKMAIAVALKNSMLSS 450


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