BLASTX nr result

ID: Salvia21_contig00033072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00033072
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26829.3| unnamed protein product [Vitis vinifera]              275   1e-71
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   261   1e-67
emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]   257   2e-66
ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   253   4e-65

>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  275 bits (702), Expect = 1e-71
 Identities = 154/296 (52%), Positives = 200/296 (67%), Gaps = 15/296 (5%)
 Frame = +2

Query: 5    EENLVMMPGYCLAGTIGHKLMSAKIPTQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDL 184
            E NLV +PGYCLAGTIGHKL + K PT+I LD+D++I VRCQIHQLSFSPHTDAKGIMDL
Sbjct: 398  EMNLVTLPGYCLAGTIGHKLTTGK-PTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDL 456

Query: 185  IKFLSPKHVILVHGEKPKMGTLREKIQSELAIECCYPANNETVLIPSTRHIEAGASDAFL 364
            +KFLSPKHVILVHGEKPKM +L+ KI+S+L I+C YPANN+TV IPST  ++A  S  F+
Sbjct: 457  VKFLSPKHVILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFI 516

Query: 365  QSCLAPNFKFLKT------NVGSDERTIAHPLLQVYDDRVAQGILTLQ---NPRVFSQNE 517
            +S L PNFKF+KT      N+ S E T A  +LQV+D+RVA+GIL ++     +V  QNE
Sbjct: 517  RSSLNPNFKFVKTISEDKSNLVSKE-TEATSVLQVHDERVAEGILIVEKSKKAKVVHQNE 575

Query: 518  LRDVLGVENHQVKFAHCWSAAYDSDWSPSISQKNSLLQLLFGIVSRDFPDCIMLDSQKSI 697
            L  ++G + H V+FA+C           S S + S L LLF  ++      I  D  + +
Sbjct: 576  LLLMIGKDKHDVQFAYCCPNVV------STSDECSWLHLLFAKLATKLGGNIQ-DFGQHL 628

Query: 698  QVGSFVASLCSREECP------SSNEDALHFCCTWSATDEELAWKVISLVKNVKLS 847
            QV S   S+C ++ CP         E A+ FCCTWS  D  LAW++IS+++N+ LS
Sbjct: 629  QVDSIHISVCLKDICPYRTTDGPQKEPAVFFCCTWSVADVNLAWEIISIMENLDLS 684


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
            predicted protein [Populus trichocarpa]
          Length = 639

 Score =  270 bits (689), Expect = 4e-70
 Identities = 151/298 (50%), Positives = 207/298 (69%), Gaps = 22/298 (7%)
 Frame = +2

Query: 5    EENLVMMPGYCLAGTIGHKLMSAKIPTQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDL 184
            E NL+ +PGYC+AGT+GHKLMS K PT+I LD+D +IDVRCQIHQLSFSPHTD+KGIMDL
Sbjct: 343  EMNLITLPGYCVAGTVGHKLMSGK-PTKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDL 401

Query: 185  IKFLSPKHVILVHGEKPKMGTLREKIQSELAIECCYPANNETVLIPSTRHIEAGASDAFL 364
             KFLSP++VILVHGEKPKM +L+E+IQ+EL I C  PAN + V IPST +++A AS+ F+
Sbjct: 402  TKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFI 461

Query: 365  QSCLAPNFKFLKTNV--GSDE---RTIAHPLLQVYDDRVAQGILTLQ---NPRVFSQNEL 520
            +SCL PNF+FLK +    SD+    T     LQV D+RVA+GIL ++     RV  Q++L
Sbjct: 462  RSCLNPNFRFLKRSKEDNSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDL 521

Query: 521  RDVLGVENHQVKFAHCWSAAYDS-------DWSPSISQKNSLLQLLFGIVSRDFPDCIML 679
              +L  + H V+FA+C +A  D+       D +  +S K S LQLLF  +S  F    + 
Sbjct: 522  LLMLRQKKHDVQFAYCCAAQLDNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIE 581

Query: 680  DSQKSIQVGSFVASLCSREECP-----SSNEDA--LHFCCTWSATDEELAWKVISLVK 832
            D  + +QV SF  S+C ++ CP     +S ++A  ++FCC+WSA DE+LAW++IS ++
Sbjct: 582  DLGEHLQVESFHVSVCLKDNCPYRIIDNSQKEAVTVYFCCSWSAADEKLAWEIISAME 639


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Cucumis sativus]
          Length = 649

 Score =  261 bits (667), Expect = 1e-67
 Identities = 144/299 (48%), Positives = 193/299 (64%), Gaps = 25/299 (8%)
 Frame = +2

Query: 11   NLVMMPGYCLAGTIGHKLMSAKIPTQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLIK 190
            NL+ +PGYC+AGT+GHKLMS K PT+I LD+  +IDV+CQ+HQL+FSPHTD+KGIMDL+K
Sbjct: 345  NLITLPGYCVAGTVGHKLMSGK-PTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVK 403

Query: 191  FLSPKHVILVHGEKPKMGTLREKIQSELAIECCYPANNETVLIPSTRHIEAGASDAFLQS 370
            FLSPKHVILVHGEKPKM  L+E+I SEL I C  PANNETV I ST  ++A AS  F+QS
Sbjct: 404  FLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQS 463

Query: 371  CLAPNFKFLKTN-VGSDERTIAHPL---------LQVYDDRVAQGILTLQN---PRVFSQ 511
            C  PNFKFLK N +  D + +++           LQV DDRV +GIL ++N    +   Q
Sbjct: 464  CSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIPLQVSDDRVNEGILVMENGKKTKALHQ 523

Query: 512  NELRDVLGVENHQVKFAHCWSAAYDS----DWSPSISQKNSLLQLLFGIVSRDFPDCIML 679
            +EL  +LG + H+V+FAHC    + S        S+S+K+  L  L   +S +  D  + 
Sbjct: 524  DELLLLLGQQEHEVRFAHCRPIYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQ 583

Query: 680  DSQKSIQVGSFVASLCSREECPSSNEDAL--------HFCCTWSATDEELAWKVISLVK 832
            +  + +QV S   S+CS+E CP    D +          CC+W   DE LAWK+IS+++
Sbjct: 584  NLGEYLQVESITLSICSKENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILE 642


>emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]
          Length = 328

 Score =  257 bits (657), Expect = 2e-66
 Identities = 149/299 (49%), Positives = 195/299 (65%), Gaps = 27/299 (9%)
 Frame = +2

Query: 32  YCLAGTIGHKLMSAKIPTQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLIKFLSPKHV 211
           YCLAGTIGHKL + K PT+I LD+D++I VRCQIHQLSFSPHTDAKGIMDL+KFLSPKHV
Sbjct: 31  YCLAGTIGHKLTTGK-PTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHV 89

Query: 212 ILVHGEKPKMGTLREKIQSELAIECCYPANNETVLIPSTRHIEAGASDAFLQSCLAPNFK 391
           ILVHGEKPKM +L+ KI+S+L I+C YPANN+TV IPST  ++A  S  F++S L PNFK
Sbjct: 90  ILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFK 149

Query: 392 FLKT------NVGSDERTIAHPLLQVYDDRVAQGILTLQ---NPRVFSQNELRDVLGVEN 544
           F+KT      N+ S E T A   LQV+D+RVA+GIL ++     +V  QNEL  ++G + 
Sbjct: 150 FVKTISEDKSNLVSKE-TKATSXLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDK 208

Query: 545 HQVKFAHCWSAAYDS-------DWS-----PSISQKNSLLQLLFGIVSRDFPDCIMLDSQ 688
           H V+FA+C      +       D++      S S + S L  LF  +S      I  D  
Sbjct: 209 HDVQFAYCCPVQIGNLERTKGMDFALSKNVVSTSDECSWLHQLFAKLSTKLGGNIQ-DFG 267

Query: 689 KSIQVGSFVASLCSREECP------SSNEDALHFCCTWSATDEELAWKVISLVKNVKLS 847
           + +QV S   S+C ++ CP         E A+ FCCTWS  D  LAW++IS+++N+ LS
Sbjct: 268 QHLQVDSIHISVCLKDICPYRTTDGPQKESAVFFCCTWSVADVNLAWEIISIMENLDLS 326


>ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 3-II-like, partial [Cucumis
            sativus]
          Length = 472

 Score =  253 bits (646), Expect = 4e-65
 Identities = 139/289 (48%), Positives = 183/289 (63%), Gaps = 15/289 (5%)
 Frame = +2

Query: 11   NLVMMPGYCLAGTIGHKLMSAKIPTQIKLDEDVKIDVRCQIHQLSFSPHTDAKGIMDLIK 190
            NL+ +PGYC+AGT+GHKLMS K PT+I LD+  +IDV+CQ+HQL+FSPHTD+KGIMDL+K
Sbjct: 189  NLITLPGYCVAGTVGHKLMSGK-PTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVK 247

Query: 191  FLSPKHVILVHGEKPKMGTLREKIQSELAIECCYPANNETVLIPSTRHIEAGASDAFLQS 370
            FLSPKHVILVHGEKPKM  L+E+I SEL I C  PANNETV I ST  ++A AS  F+QS
Sbjct: 248  FLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQS 307

Query: 371  CLAPNFKFLKTNVGSDERTIAHPLLQVYDDRVAQGILTLQN---PRVFSQNELRDVLGVE 541
            C  PNF                P LQV DDRV +GIL ++N    +   Q+EL  +LG +
Sbjct: 308  CSTPNFNL-----------SCGPALQVSDDRVNEGILVMENGKKXKALHQDELLLLLGQQ 356

Query: 542  NHQVKFAHCWSAAYDS----DWSPSISQKNSLLQLLFGIVSRDFPDCIMLDSQKSIQVGS 709
             H+V+FAHC    + S        S+S+K+  L  L   +S +  D  + +  + +QV S
Sbjct: 357  EHEVRFAHCRPIYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVES 416

Query: 710  FVASLCSREECPSSNEDAL--------HFCCTWSATDEELAWKVISLVK 832
               S+CS+E CP    D +          CC+W   DE LAWK+IS+++
Sbjct: 417  ITLSICSKENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILE 465


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