BLASTX nr result

ID: Salvia21_contig00031839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00031839
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190583.1| histone deacetylase 5 [Arabidopsis thaliana]...   164   7e-39
ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana] gi...   164   7e-39
dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]        164   7e-39
gb|ACF78632.1| unknown [Zea mays] gi|223975929|gb|ACN32152.1| un...   164   9e-39
ref|NP_001105019.1| probable histone deacetylase 19 [Zea mays] g...   164   9e-39

>ref|NP_001190583.1| histone deacetylase 5 [Arabidopsis thaliana]
           gi|332010035|gb|AED97418.1| histone deacetylase 5
           [Arabidopsis thaliana]
          Length = 664

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/95 (76%), Positives = 84/95 (88%)
 Frame = +3

Query: 6   AEKVASGEIDSAFAIVRPPGHHAKEGEPMGFCLYNNVAIAASYLLNERQELGINKILIVD 185
           AEKVA GE+D  FAIVRPPGHHA+  E MGFCL+NNVA+AAS+LLNER +LG+ KILIVD
Sbjct: 137 AEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVD 196

Query: 186 WDVHHGNGTQNMFYKDPRVLVFSVHRHDFGTFYPS 290
           WDVHHGNGTQ MF+KDPRVL FSVHRH++G FYP+
Sbjct: 197 WDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPA 231


>ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana]
           gi|75247631|sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone
           deacetylase 5 gi|20259320|gb|AAM13986.1| putative
           histone deacetylase [Arabidopsis thaliana]
           gi|21539579|gb|AAM53342.1| histone deacetylase-like
           protein [Arabidopsis thaliana]
           gi|23197730|gb|AAN15392.1| histone deacetylase-like
           protein [Arabidopsis thaliana]
           gi|332010034|gb|AED97417.1| histone deacetylase 5
           [Arabidopsis thaliana]
          Length = 660

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/95 (76%), Positives = 84/95 (88%)
 Frame = +3

Query: 6   AEKVASGEIDSAFAIVRPPGHHAKEGEPMGFCLYNNVAIAASYLLNERQELGINKILIVD 185
           AEKVA GE+D  FAIVRPPGHHA+  E MGFCL+NNVA+AAS+LLNER +LG+ KILIVD
Sbjct: 137 AEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVD 196

Query: 186 WDVHHGNGTQNMFYKDPRVLVFSVHRHDFGTFYPS 290
           WDVHHGNGTQ MF+KDPRVL FSVHRH++G FYP+
Sbjct: 197 WDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPA 231


>dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1108

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/95 (76%), Positives = 84/95 (88%)
 Frame = +3

Query: 6    AEKVASGEIDSAFAIVRPPGHHAKEGEPMGFCLYNNVAIAASYLLNERQELGINKILIVD 185
            AEKVA GE+D  FAIVRPPGHHA+  E MGFCL+NNVA+AAS+LLNER +LG+ KILIVD
Sbjct: 813  AEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVD 872

Query: 186  WDVHHGNGTQNMFYKDPRVLVFSVHRHDFGTFYPS 290
            WDVHHGNGTQ MF+KDPRVL FSVHRH++G FYP+
Sbjct: 873  WDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPA 907



 Score =  160 bits (406), Expect = 8e-38
 Identities = 71/94 (75%), Positives = 82/94 (87%)
 Frame = +3

Query: 6   AEKVASGEIDSAFAIVRPPGHHAKEGEPMGFCLYNNVAIAASYLLNERQELGINKILIVD 185
           AEKVA GE+D  FAIVRPPGHHA+  E MGFCL+NNVA+AAS+LLNER +L + KILIVD
Sbjct: 170 AEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVD 229

Query: 186 WDVHHGNGTQNMFYKDPRVLVFSVHRHDFGTFYP 287
           WD+HHGNGTQ MF+KD RVL+FSVHRHD G+FYP
Sbjct: 230 WDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYP 263


>gb|ACF78632.1| unknown [Zea mays] gi|223975929|gb|ACN32152.1| unknown [Zea mays]
           gi|414590783|tpg|DAA41354.1| TPA: histone deacetylase 6
           [Zea mays]
          Length = 700

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/95 (77%), Positives = 84/95 (88%)
 Frame = +3

Query: 6   AEKVASGEIDSAFAIVRPPGHHAKEGEPMGFCLYNNVAIAASYLLNERQELGINKILIVD 185
           AEKVA+GE+ SA A+VRPPGHHA+  E MGFCL+NNVA+AA+YLLNER +LGI KILIVD
Sbjct: 125 AEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVD 184

Query: 186 WDVHHGNGTQNMFYKDPRVLVFSVHRHDFGTFYPS 290
           WDVHHGNGTQ MFY DPRVL FSVHR D+G+FYPS
Sbjct: 185 WDVHHGNGTQKMFYDDPRVLFFSVHRFDYGSFYPS 219


>ref|NP_001105019.1| probable histone deacetylase 19 [Zea mays]
           gi|32968028|gb|AAP92528.1|AF322918_1 HDA1 [Zea mays]
          Length = 701

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/95 (77%), Positives = 84/95 (88%)
 Frame = +3

Query: 6   AEKVASGEIDSAFAIVRPPGHHAKEGEPMGFCLYNNVAIAASYLLNERQELGINKILIVD 185
           AEKVA+GE+ SA A+VRPPGHHA+  E MGFCL+NNVA+AA+YLLNER +LGI KILIVD
Sbjct: 125 AEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVD 184

Query: 186 WDVHHGNGTQNMFYKDPRVLVFSVHRHDFGTFYPS 290
           WDVHHGNGTQ MFY DPRVL FSVHR D+G+FYPS
Sbjct: 185 WDVHHGNGTQKMFYDDPRVLFFSVHRFDYGSFYPS 219


Top