BLASTX nr result

ID: Salvia21_contig00031781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00031781
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_003610281.1| Pentatricopeptide repeat-containing protein ...    58   7e-07

>ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 39/74 (52%)
 Frame = +2

Query: 2   LKLINLSTAFSHLNQTHAQLILNGHLHDNIVVTKFLQKLLDXXXXXXXXXXXXXXXXXDL 181
           L LI+ +  F HL +THAQLI NG+ HD   VTK  QKL D                 D+
Sbjct: 12  LALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDI 71

Query: 182 FLYNALIKGLRDTP 223
           FL+N LIKG   +P
Sbjct: 72  FLFNVLIKGFSFSP 85


>ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511336|gb|AES92478.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 783

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
 Frame = +2

Query: 8   LINLSTAFSHLNQTHAQLILNGHLHDNIVVTKFLQKLLDXXXXXXXXXXXXXXXXXDLFL 187
           LIN ++ F HL QTHAQ ILNG+  D   +TK  QKL D                 D+FL
Sbjct: 18  LINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFL 77

Query: 188 YNALIKG--LRDTPFDS 232
           +N L++G  L D+P  S
Sbjct: 78  FNVLVRGFSLNDSPSSS 94


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