BLASTX nr result

ID: Salvia21_contig00031760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00031760
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   463   e-128
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              463   e-128
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   452   e-125
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   451   e-124
ref|XP_003605339.1| Pentatricopeptide repeat-containing protein ...   446   e-123

>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
            [Vitis vinifera]
          Length = 644

 Score =  463 bits (1192), Expect = e-128
 Identities = 211/327 (64%), Positives = 269/327 (82%)
 Frame = -1

Query: 981  PTPPTFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNL 802
            P+  TFNVLINGLCKKGD+ R  KLVDNMFLKGCVPNE+TYNT+I+GLCLKGKLDKAV+L
Sbjct: 240  PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 299

Query: 801  LSRMLSNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFR 622
            L RM+++K  PND+TYGT+INGLVK+G + D +H+L  +EERG+  N YAYS +I GLF+
Sbjct: 300  LDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 359

Query: 621  EGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMIDAGCLPNAHT 442
            E KS+EA+ LW+KM+EKGC+PN VVYSA+IDGLC++GK  EA+E   +M++ GC PNA T
Sbjct: 360  EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 419

Query: 441  YSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVL 262
            YSSL+KGFF+ G+  KA+ +WKE+ +   V NE+CYSVLIHG C++GKL  A+++W  +L
Sbjct: 420  YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 479

Query: 261  AKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGS 82
             +GL PDVVAYSSMIHGLCN G VE GL LFNEML + S+S+PDV+TYNI++ ALC+Q S
Sbjct: 480  GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 539

Query: 81   ISHAMDILNCMLNEGCDPDSVTCKSFL 1
            ISHA+D+LN ML+ GC+PD +TC  FL
Sbjct: 540  ISHAIDLLNSMLDRGCNPDLITCNIFL 566



 Score =  149 bits (375), Expect = 1e-33
 Identities = 82/290 (28%), Positives = 156/290 (53%), Gaps = 2/290 (0%)
 Frame = -1

Query: 864  TYNTLIHGLCLKGKLDKAVNLLSRMLSNK--LRPNDITYGTIINGLVKKGPASDALHMLL 691
            ++N++++ +  +G   +A+      +  K  + PN +++  +I  + K G    A+ +  
Sbjct: 137  SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 690  GMEERGYAPNGYAYSAIIGGLFREGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDG 511
             M  +   P+ + Y  ++ GL +E + DEA+ L  +M  +GC P++V ++ +I+GLC+ G
Sbjct: 197  EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 510  KPHEAEEFFSQMIDAGCLPNAHTYSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYS 331
                  +    M   GC+PN  TY++++ G    G  DKAV L   +V    V N+V Y 
Sbjct: 257  DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 330  VLIHGFCKNGKLENALVVWKQVLAKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYK 151
             LI+G  K G+  + + +   +  +G   +  AYS++I GL      E+ + L+ +M+ K
Sbjct: 317  TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376

Query: 150  ASNSKPDVITYNIIINALCRQGSISHAMDILNCMLNEGCDPDSVTCKSFL 1
                +P+++ Y+ +I+ LCR+G +  A +IL  M+N+GC P++ T  S +
Sbjct: 377  --GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 52/201 (25%), Positives = 112/201 (55%), Gaps = 3/201 (1%)
 Frame = -1

Query: 609 DEALKLWRKMIEK-GCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMI--DAGCLPNAHTY 439
           ++A++L+ +M+++  C+     +++V++ + Q+G  H A EF+   +       PN  ++
Sbjct: 116 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 175

Query: 438 SSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVLA 259
           + ++K   ++G  D+A+ +++E+  +    +   Y  L+ G CK  +++ A+++  ++  
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 235

Query: 258 KGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGSI 79
           +G  P  V ++ +I+GLC  G + +   L + M  K     P+ +TYN IIN LC +G +
Sbjct: 236 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK--GCVPNEVTYNTIINGLCLKGKL 293

Query: 78  SHAMDILNCMLNEGCDPDSVT 16
             A+ +L+ M+   C P+ VT
Sbjct: 294 DKAVSLLDRMVASKCVPNDVT 314



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
 Frame = -1

Query: 981 PTPPTFNVLINGLCKKGDLARAAKLVDNMFLK--GCVPNEITYNTLIHGLCLKGKLDKAV 808
           P    ++ +I+GLC  G +    KL + M  +     P+ +TYN L+  LC +  +  A+
Sbjct: 485 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 544

Query: 807 NLLSRMLSNKLRPNDITYGTIINGLVKK-GPASDALHMLLGMEERGYAPNGYAYSAIIGG 631
           +LL+ ML     P+ IT    +N L +K  P  D    L                 ++  
Sbjct: 545 DLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFL---------------DELVVR 589

Query: 630 LFREGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGK 508
           L +  +   A K+   M++K   PN   +  +I  LC+  K
Sbjct: 590 LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 630


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  463 bits (1192), Expect = e-128
 Identities = 211/327 (64%), Positives = 269/327 (82%)
 Frame = -1

Query: 981  PTPPTFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNL 802
            P+  TFNVLINGLCKKGD+ R  KLVDNMFLKGCVPNE+TYNT+I+GLCLKGKLDKAV+L
Sbjct: 256  PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 315

Query: 801  LSRMLSNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFR 622
            L RM+++K  PND+TYGT+INGLVK+G + D +H+L  +EERG+  N YAYS +I GLF+
Sbjct: 316  LDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 375

Query: 621  EGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMIDAGCLPNAHT 442
            E KS+EA+ LW+KM+EKGC+PN VVYSA+IDGLC++GK  EA+E   +M++ GC PNA T
Sbjct: 376  EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 435

Query: 441  YSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVL 262
            YSSL+KGFF+ G+  KA+ +WKE+ +   V NE+CYSVLIHG C++GKL  A+++W  +L
Sbjct: 436  YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 495

Query: 261  AKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGS 82
             +GL PDVVAYSSMIHGLCN G VE GL LFNEML + S+S+PDV+TYNI++ ALC+Q S
Sbjct: 496  GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 555

Query: 81   ISHAMDILNCMLNEGCDPDSVTCKSFL 1
            ISHA+D+LN ML+ GC+PD +TC  FL
Sbjct: 556  ISHAIDLLNSMLDRGCNPDLITCNIFL 582



 Score =  149 bits (375), Expect = 1e-33
 Identities = 82/290 (28%), Positives = 156/290 (53%), Gaps = 2/290 (0%)
 Frame = -1

Query: 864  TYNTLIHGLCLKGKLDKAVNLLSRMLSNK--LRPNDITYGTIINGLVKKGPASDALHMLL 691
            ++N++++ +  +G   +A+      +  K  + PN +++  +I  + K G    A+ +  
Sbjct: 153  SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 690  GMEERGYAPNGYAYSAIIGGLFREGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDG 511
             M  +   P+ + Y  ++ GL +E + DEA+ L  +M  +GC P++V ++ +I+GLC+ G
Sbjct: 213  EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 272

Query: 510  KPHEAEEFFSQMIDAGCLPNAHTYSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYS 331
                  +    M   GC+PN  TY++++ G    G  DKAV L   +V    V N+V Y 
Sbjct: 273  DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 332

Query: 330  VLIHGFCKNGKLENALVVWKQVLAKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYK 151
             LI+G  K G+  + + +   +  +G   +  AYS++I GL      E+ + L+ +M+ K
Sbjct: 333  TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 392

Query: 150  ASNSKPDVITYNIIINALCRQGSISHAMDILNCMLNEGCDPDSVTCKSFL 1
                +P+++ Y+ +I+ LCR+G +  A +IL  M+N+GC P++ T  S +
Sbjct: 393  --GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 52/201 (25%), Positives = 112/201 (55%), Gaps = 3/201 (1%)
 Frame = -1

Query: 609 DEALKLWRKMIEK-GCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMI--DAGCLPNAHTY 439
           ++A++L+ +M+++  C+     +++V++ + Q+G  H A EF+   +       PN  ++
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 191

Query: 438 SSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVLA 259
           + ++K   ++G  D+A+ +++E+  +    +   Y  L+ G CK  +++ A+++  ++  
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251

Query: 258 KGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGSI 79
           +G  P  V ++ +I+GLC  G + +   L + M  K     P+ +TYN IIN LC +G +
Sbjct: 252 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK--GCVPNEVTYNTIINGLCLKGKL 309

Query: 78  SHAMDILNCMLNEGCDPDSVT 16
             A+ +L+ M+   C P+ VT
Sbjct: 310 DKAVSLLDRMVASKCVPNDVT 330



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
 Frame = -1

Query: 981 PTPPTFNVLINGLCKKGDLARAAKLVDNMFLK--GCVPNEITYNTLIHGLCLKGKLDKAV 808
           P    ++ +I+GLC  G +    KL + M  +     P+ +TYN L+  LC +  +  A+
Sbjct: 501 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 560

Query: 807 NLLSRMLSNKLRPNDITYGTIINGLVKK-GPASDALHMLLGMEERGYAPNGYAYSAIIGG 631
           +LL+ ML     P+ IT    +N L +K  P  D    L                 ++  
Sbjct: 561 DLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFL---------------DELVVR 605

Query: 630 LFREGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGK 508
           L +  +   A K+   M++K   PN   +  +I  LC+  K
Sbjct: 606 LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 646


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
            predicted protein [Populus trichocarpa]
          Length = 641

 Score =  452 bits (1162), Expect = e-125
 Identities = 215/327 (65%), Positives = 264/327 (80%)
 Frame = -1

Query: 981  PTPPTFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNL 802
            P+P TFNVLINGLCKKGDLAR AKLVDNMFLKGC PNE+TYNTLIHGLCLKGKL+KA++L
Sbjct: 237  PSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISL 296

Query: 801  LSRMLSNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFR 622
            L RM+S+K  PN +TYGTIINGLVK+G A D   +L  MEERGY  N Y YSA+I GLF+
Sbjct: 297  LDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFK 356

Query: 621  EGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMIDAGCLPNAHT 442
            EGKS EA++L+++M  K C+ NT+VYSAVIDGLC+DGKP EA E  S+M +  C PNA+T
Sbjct: 357  EGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYT 416

Query: 441  YSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVL 262
            YSSLMKGFF+ G+  KA+ +WK++ +  +  NEVCYSVLIHG CK+GK++ A++VW Q+L
Sbjct: 417  YSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQML 476

Query: 261  AKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGS 82
             KG  PDVVAY SMI+GL N GLVE  L L+NEML +  +S+PDV+TYNI++NALC+Q S
Sbjct: 477  GKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSS 536

Query: 81   ISHAMDILNCMLNEGCDPDSVTCKSFL 1
            IS A+D+LN ML+ GCDPD VTC  FL
Sbjct: 537  ISRAIDLLNSMLDRGCDPDLVTCIIFL 563



 Score =  144 bits (364), Expect = 2e-32
 Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 4/311 (1%)
 Frame = -1

Query: 921  RAAKLVDNMFLK-GCVPNEITYNTLIHGLCLKGKLDKAVNLLSRMLSNK---LRPNDITY 754
            +A  L D M  +  C     ++N++++ +  +G   +A+   + ++  K   + PN +T+
Sbjct: 113  KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTF 172

Query: 753  GTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFREGKSDEALKLWRKMIE 574
              +I  + K G   DA+ M   M      P+ Y Y  ++ GL +  + DEA+ L  +M  
Sbjct: 173  NLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 232

Query: 573  KGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMIDAGCLPNAHTYSSLMKGFFQVGDCDK 394
             GC P+ V ++ +I+GLC+ G      +    M   GC PN  TY++L+ G    G  +K
Sbjct: 233  DGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEK 292

Query: 393  AVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVLAKGLTPDVVAYSSMIH 214
            A+ L   +V    V N V Y  +I+G  K G+  +   V   +  +G   +   YS++I 
Sbjct: 293  AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALIS 352

Query: 213  GLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGSISHAMDILNCMLNEGC 34
            GL   G  ++ + LF EM  K    + + I Y+ +I+ LCR G    A+++L+ M N  C
Sbjct: 353  GLFKEGKSQEAMQLFKEMTVK--ECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410

Query: 33   DPDSVTCKSFL 1
             P++ T  S +
Sbjct: 411  KPNAYTYSSLM 421



 Score =  135 bits (340), Expect = 2e-29
 Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 23/294 (7%)
 Frame = -1

Query: 966  FNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNLLSRML 787
            ++ LI+GL K+G    A +L   M +K C  N I Y+ +I GLC  GK D+A+ +LS M 
Sbjct: 347  YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406

Query: 786  SNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFREGKSD 607
            +N+ +PN  TY +++ G  + G    A+ M   M +  +  N   YS +I GL ++GK  
Sbjct: 407  NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466

Query: 606  EALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMI--DAGCLPNAHTYSS 433
            EA+ +W +M+ KGCKP+ V Y ++I+GL   G   +A + +++M+  +    P+  TY+ 
Sbjct: 467  EAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNI 526

Query: 432  LMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSV---------------------LIHG 316
            L+    +     +A+ L   ++++G   + V   +                     L+  
Sbjct: 527  LLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVR 586

Query: 315  FCKNGKLENALVVWKQVLAKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLY 154
              K  ++  A  + + +L K L P    ++ ++  LCN   V+  +     +LY
Sbjct: 587  LLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  451 bits (1161), Expect = e-124
 Identities = 211/327 (64%), Positives = 264/327 (80%)
 Frame = -1

Query: 981  PTPPTFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNL 802
            P+P TFNVLINGLCKKGD  R  KLVDNMFLKGCVPNE+TYNTLIHGLCLKGKLDKA++L
Sbjct: 249  PSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSL 308

Query: 801  LSRMLSNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFR 622
            L RM+S+K  PN++TYGTIINGLVK+G A D   +L+ MEERGY  N Y YS ++ GLF+
Sbjct: 309  LDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFK 368

Query: 621  EGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMIDAGCLPNAHT 442
            EGKS+EA++L+++ ++KGCK NTV+YSA++DGLC+D KP EA +  S+M D GC PNA T
Sbjct: 369  EGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFT 428

Query: 441  YSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVL 262
            +SSLMKGFF+VG+  KA+ +WK++ +    +NEVCYSVLIHG CK+GK+  A++VW ++L
Sbjct: 429  FSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKML 488

Query: 261  AKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGS 82
            A G  PDVVAYSSMI GLC+ G VE+ L L+NEML    +S+PDVITYNI+ NALC+Q S
Sbjct: 489  ATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSS 548

Query: 81   ISHAMDILNCMLNEGCDPDSVTCKSFL 1
            IS A+D+LN ML+ GCDPD VTC  FL
Sbjct: 549  ISRAVDLLNSMLDRGCDPDLVTCNIFL 575



 Score =  137 bits (346), Expect = 3e-30
 Identities = 94/360 (26%), Positives = 167/360 (46%), Gaps = 37/360 (10%)
 Frame = -1

Query: 969  TFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNLLSRM 790
            TF  LI       D     K+++ M L+  V +E ++  +          +KA+ L  RM
Sbjct: 74   TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRM 133

Query: 789  -LSNKLRPNDITYGTIINGLVKKGPASDALHM---LLGMEERGYAPNGYAYSAIIGGLFR 622
                  +P   ++ +++N +++ G    AL     ++G ++    PN  +++ II  + +
Sbjct: 134  SFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK 193

Query: 621  EGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMIDAGCLPNAHT 442
             G  D A++L+R+M  + C P+   Y  ++DGLC+  +  EA     +M   GC P+  T
Sbjct: 194  LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253

Query: 441  YSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVL 262
            ++ L+ G  + GD  +   L   +  KG V NEV Y+ LIHG C  GKL+ AL +  +++
Sbjct: 254  FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313

Query: 261  AKGLTPDVVAYSSMIHGLCNVG----------LVEQGLSLFNEMLYKA------------ 148
            +    P+ V Y ++I+GL   G          L+E+   + NE +Y              
Sbjct: 314  SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373

Query: 147  -----------SNSKPDVITYNIIINALCRQGSISHAMDILNCMLNEGCDPDSVTCKSFL 1
                          K + + Y+ +++ LCR      AM IL+ M ++GC P++ T  S +
Sbjct: 374  EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433



 Score =  113 bits (283), Expect = 6e-23
 Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
 Frame = -1

Query: 966  FNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNLLSRML 787
            ++VL++GL K+G    A +L      KGC  N + Y+ L+ GLC   K D+A+ +LS M 
Sbjct: 359  YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMT 418

Query: 786  SNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFREGKSD 607
                 PN  T+ +++ G  + G +  A+ +   M +   A N   YS +I GL ++GK  
Sbjct: 419  DKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVM 478

Query: 606  EALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMI--------------- 472
            EA+ +W KM+  GC+P+ V YS++I GLC  G   EA + +++M+               
Sbjct: 479  EAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNI 538

Query: 471  ----------------------DAGCLPNAHTYSSLMKGFFQVGDCDKAVLLWKEVVEKG 358
                                  D GC P+  T             C+  + + +E ++  
Sbjct: 539  LFNALCKQSSISRAVDLLNSMLDRGCDPDLVT-------------CNIFLRMLREKLDPP 585

Query: 357  YVDNEVCYSVLIHGFCKNGKLENALVVWKQVLAKGLTPDVVAYSSMIHGLC 205
              D       L+    K  +   A  + + +L K L+P    ++ ++H LC
Sbjct: 586  Q-DGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELC 635



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
 Frame = -1

Query: 981 PTPPTFNVLINGLCKKGDLARAAKLVDNMFL--KGCVPNEITYNTLIHGLCLKGKLDKAV 808
           P    ++ +I GLC  G +  A KL + M        P+ ITYN L + LC +  + +AV
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAV 553

Query: 807 NLLSRMLSNKLRPNDITYGTIINGLVKK-GPASDALHMLLGMEERGYAPNGYAYSAIIGG 631
           +LL+ ML     P+ +T    +  L +K  P  D    L                 ++  
Sbjct: 554 DLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFL---------------DELVVR 598

Query: 630 LFREGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGK 508
           L +  ++  A K+   M++K   P    ++ V+  LCQ  K
Sbjct: 599 LLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKK 639


>ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355506394|gb|AES87536.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  446 bits (1147), Expect = e-123
 Identities = 200/327 (61%), Positives = 267/327 (81%)
 Frame = -1

Query: 981  PTPPTFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNL 802
            P P  FNVLI+ LCKKGDL+RA+KLVDNMFLKGCVPNE+TYN+L+HGLCLKGKLDKA++L
Sbjct: 68   PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSL 127

Query: 801  LSRMLSNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFR 622
            L+RM++NK  PNDIT+GT+++G VK G A D + +L+ +EE+GY  N ++YS++I GLF+
Sbjct: 128  LNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK 187

Query: 621  EGKSDEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMIDAGCLPNAHT 442
            EGK +  ++LW++M+EKGCKPNT+VYSA+IDGLC++GKP EA+E+  +M + G  PN+ T
Sbjct: 188  EGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 247

Query: 441  YSSLMKGFFQVGDCDKAVLLWKEVVEKGYVDNEVCYSVLIHGFCKNGKLENALVVWKQVL 262
            YSSLM G+F+ GD  KA+L+WKE+ +     +EVCYS+LI+G CKNGKL+ AL+VWKQ+L
Sbjct: 248  YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 307

Query: 261  AKGLTPDVVAYSSMIHGLCNVGLVEQGLSLFNEMLYKASNSKPDVITYNIIINALCRQGS 82
            ++G+  DVVAYSSMIHG CN  LVEQG+ LFN+ML      +PDV+TYNI++NA C + S
Sbjct: 308  SRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNS 367

Query: 81   ISHAMDILNCMLNEGCDPDSVTCKSFL 1
            +S A+DILN ML++GCDPD +TC  FL
Sbjct: 368  VSRAIDILNTMLDQGCDPDFITCDIFL 394



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
 Frame = -1

Query: 969 TFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEITYNTLIHGLCLKGKLDKAVNLLSRM 790
           +++ LI+GL K+G      +L   M  KGC PN I Y+ LI GLC +GK D+A   L  M
Sbjct: 177 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 236

Query: 789 LSNKLRPNDITYGTIINGLVKKGPASDALHMLLGMEERGYAPNGYAYSAIIGGLFREGKS 610
            +    PN  TY +++ G  + G    A+ +   M +     +   YS +I GL + GK 
Sbjct: 237 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 296

Query: 609 DEALKLWRKMIEKGCKPNTVVYSAVIDGLCQDGKPHEAEEFFSQMI-------------- 472
            EAL +W++M+ +G K + V YS++I G C      +  + F+QM+              
Sbjct: 297 KEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYN 356

Query: 471 -----------------------DAGCLPNAHTYSSLMK 424
                                  D GC P+  T    +K
Sbjct: 357 ILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLK 395


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