BLASTX nr result

ID: Salvia21_contig00030397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00030397
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
ref|NP_001077725.4| Poly(A)-specific ribonuclease PARN [Arabidop...   151   7e-35
dbj|BAE47489.1| polyA specific ribonuclease [Arabidopsis thaliana]    151   7e-35
ref|NP_175983.5| Poly(A)-specific ribonuclease PARN [Arabidopsis...   151   7e-35
emb|CBI39748.3| unnamed protein product [Vitis vinifera]              150   1e-34

>ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|222847638|gb|EEE85185.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  174 bits (440), Expect = 1e-41
 Identities = 97/178 (54%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
 Frame = -1

Query: 532 RSQEEEALKCLDSVYKDDVLDVSSNLGNGSDMQLVRMADILFAERMKNVVGEWRAGLLRG 353
           R QE+EAL+ L+  Y++++ +         D+ LV + DILF+ERMKN + EWR GLL+ 
Sbjct: 162 RGQEDEALRLLNLRYENELSE------QARDVPLVSITDILFSERMKNRLREWRDGLLKD 215

Query: 352 VNCGSESPGS-LNDTNXXXXXXXXXTRPALAVNGLTSRQLKLIKLVTEKHFNDLAYVHVT 176
            + GS+  GS LND+N          RPAL++NG TSRQL+LI+ VT+KHF DLA V V 
Sbjct: 216 TSGGSQLEGSFLNDSNQQFQNIFYKMRPALSLNGFTSRQLRLIQSVTKKHFKDLASVRVE 275

Query: 175 GETSCRLPLIVYTDSAKDRELLKGEVKACQRKAAEMSIKSAIGFRHVIDLLSSERKLI 2
           GE+SC   L+VYTDS  DR+LLK EV    R+ AEM IK+AIGFRHVIDLLSSE+KLI
Sbjct: 276 GESSCSQQLVVYTDSESDRDLLKKEVMDDYRRQAEMKIKAAIGFRHVIDLLSSEKKLI 333


>ref|NP_001077725.4| Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana]
           gi|78484002|dbj|BAE47490.1| polyA specific ribonuclease
           [Arabidopsis thaliana] gi|332195191|gb|AEE33312.1|
           Poly(A)-specific ribonuclease PARN [Arabidopsis
           thaliana]
          Length = 540

 Score =  151 bits (381), Expect = 7e-35
 Identities = 81/177 (45%), Positives = 113/177 (63%)
 Frame = -1

Query: 532 RSQEEEALKCLDSVYKDDVLDVSSNLGNGSDMQLVRMADILFAERMKNVVGEWRAGLLRG 353
           R +EEEA K L  ++ +D +D S   G   +++LVR+AD+LFA RM+ ++ EWR+GLL G
Sbjct: 24  RREEEEASKRLKMLHGEDGIDSS---GETEELKLVRLADVLFAARMEKLLNEWRSGLLHG 80

Query: 352 VNCGSESPGSLNDTNXXXXXXXXXTRPALAVNGLTSRQLKLIKLVTEKHFNDLAYVHVTG 173
            N  SE P   N +N          RPAL++ G TS QL+++  V  KHF DL Y+H   
Sbjct: 81  GNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSND 140

Query: 172 ETSCRLPLIVYTDSAKDRELLKGEVKACQRKAAEMSIKSAIGFRHVIDLLSSERKLI 2
           ++S    ++VYTDS  D+E L  E K  +++ AE  I+SAIGFR VIDLL+SE+KLI
Sbjct: 141 KSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLI 197


>dbj|BAE47489.1| polyA specific ribonuclease [Arabidopsis thaliana]
          Length = 540

 Score =  151 bits (381), Expect = 7e-35
 Identities = 81/177 (45%), Positives = 113/177 (63%)
 Frame = -1

Query: 532 RSQEEEALKCLDSVYKDDVLDVSSNLGNGSDMQLVRMADILFAERMKNVVGEWRAGLLRG 353
           R +EEEA K L  ++ +D +D S   G   +++LVR+AD+LFA RM+ ++ EWR+GLL G
Sbjct: 24  RREEEEASKRLKMLHGEDGIDSS---GETEELKLVRLADVLFAARMEKLLNEWRSGLLHG 80

Query: 352 VNCGSESPGSLNDTNXXXXXXXXXTRPALAVNGLTSRQLKLIKLVTEKHFNDLAYVHVTG 173
            N  SE P   N +N          RPAL++ G TS QL+++  V  KHF DL Y+H   
Sbjct: 81  GNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSND 140

Query: 172 ETSCRLPLIVYTDSAKDRELLKGEVKACQRKAAEMSIKSAIGFRHVIDLLSSERKLI 2
           ++S    ++VYTDS  D+E L  E K  +++ AE  I+SAIGFR VIDLL+SE+KLI
Sbjct: 141 KSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLI 197


>ref|NP_175983.5| Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana]
           gi|60390594|sp|Q9LG26.2|PARN_ARATH RecName:
           Full=Poly(A)-specific ribonuclease PARN; AltName:
           Full=Polyadenylate-specific ribonuclease; Short=AtPARN;
           AltName: Full=Protein ABA hypersensitive germination 2
           gi|65736526|dbj|BAD98514.1| poly(A)-specific
           ribonuclease [Arabidopsis thaliana]
           gi|332195190|gb|AEE33311.1| Poly(A)-specific
           ribonuclease PARN [Arabidopsis thaliana]
          Length = 689

 Score =  151 bits (381), Expect = 7e-35
 Identities = 81/177 (45%), Positives = 113/177 (63%)
 Frame = -1

Query: 532 RSQEEEALKCLDSVYKDDVLDVSSNLGNGSDMQLVRMADILFAERMKNVVGEWRAGLLRG 353
           R +EEEA K L  ++ +D +D S   G   +++LVR+AD+LFA RM+ ++ EWR+GLL G
Sbjct: 173 RREEEEASKRLKMLHGEDGIDSS---GETEELKLVRLADVLFAARMEKLLNEWRSGLLHG 229

Query: 352 VNCGSESPGSLNDTNXXXXXXXXXTRPALAVNGLTSRQLKLIKLVTEKHFNDLAYVHVTG 173
            N  SE P   N +N          RPAL++ G TS QL+++  V  KHF DL Y+H   
Sbjct: 230 GNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSND 289

Query: 172 ETSCRLPLIVYTDSAKDRELLKGEVKACQRKAAEMSIKSAIGFRHVIDLLSSERKLI 2
           ++S    ++VYTDS  D+E L  E K  +++ AE  I+SAIGFR VIDLL+SE+KLI
Sbjct: 290 KSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLI 346


>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  150 bits (378), Expect = 1e-34
 Identities = 86/177 (48%), Positives = 111/177 (62%)
 Frame = -1

Query: 532 RSQEEEALKCLDSVYKDDVLDVSSNLGNGSDMQLVRMADILFAERMKNVVGEWRAGLLRG 353
           R QE E L+CL+S   D++  +  N+    D  LV +AD+LF+ERMKN   EWR  LL+ 
Sbjct: 175 REQENEMLRCLNSECDDEMSLLWRNMKEVRDTPLVSVADVLFSERMKNRFNEWRKELLQD 234

Query: 352 VNCGSESPGSLNDTNXXXXXXXXXTRPALAVNGLTSRQLKLIKLVTEKHFNDLAYVHVTG 173
              GS+   + ND            RPAL +NG T+ QL+LI+LV +KHF DL Y+  +G
Sbjct: 235 RKGGSQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQLRLIQLVIKKHFKDLVYIRSSG 294

Query: 172 ETSCRLPLIVYTDSAKDRELLKGEVKACQRKAAEMSIKSAIGFRHVIDLLSSERKLI 2
           + S    LIVY DS  D+ LL  EVK   R+ AEM IK+A+GFRHVIDLLSSE+KLI
Sbjct: 295 DGSYS-ELIVYIDSDNDKNLLMKEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLI 350


Top