BLASTX nr result

ID: Salvia21_contig00030098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00030098
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...   110   9e-23
ref|XP_003637238.1| Pentatricopeptide repeat-containing protein ...   110   9e-23
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...   108   4e-22

>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/102 (55%), Positives = 71/102 (69%)
 Frame = +1

Query: 4   PTEIIHKLVLTAASEAKRADIIFMMHKKLVAMGLNLNLTVYSNLITILCGLKMTRRAASV 183
           P   IH+ +L A S+ +RAD I  MHK+LV MGL  N  VY++LIT+LCGL MT+RA  V
Sbjct: 573 PNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLV 632

Query: 184 LEEMRKAGFHADTVIYNAMIQGHCKSSHLQKASDVYSQMIAE 309
           L  M K G  ADTV YNA+I GH KSSH++KA   Y+QM+ E
Sbjct: 633 LNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNE 674


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/100 (56%), Positives = 72/100 (72%)
 Frame = +1

Query: 4   PTEIIHKLVLTAASEAKRADIIFMMHKKLVAMGLNLNLTVYSNLITILCGLKMTRRAASV 183
           PT IIHK +L A S +++AD I  +HKKLV MGLNLN  VY+ LIT+LC L MT++A  V
Sbjct: 653 PTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVV 712

Query: 184 LEEMRKAGFHADTVIYNAMIQGHCKSSHLQKASDVYSQMI 303
           L EM   G  AD V YNA+I+G+C  SH++KA + YSQM+
Sbjct: 713 LTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQML 752


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355503316|gb|AES84519.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = +1

Query: 4    PTEIIHKLVLTAASEAKRADIIFMMHKKLVAMGLNLNLTVYSNLITILCGLKMTRRAASV 183
            PT I HK ++ A S +++AD I  +H+KLVA GL L+LTVY+ LIT+ C L MTR+A  V
Sbjct: 738  PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVV 797

Query: 184  LEEMRKAGFHADTVIYNAMIQGHCKSSHLQKASDVYSQMIAE 309
            L+EM K G  AD V YNA+I+G+C  SH++KA   YSQM  +
Sbjct: 798  LDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD 839


>ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503173|gb|AES84376.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = +1

Query: 4   PTEIIHKLVLTAASEAKRADIIFMMHKKLVAMGLNLNLTVYSNLITILCGLKMTRRAASV 183
           PT I HK ++ A S +++AD I  +H+KLVA GL L+LTVY+ LIT+ C L MTR+A  V
Sbjct: 378 PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVV 437

Query: 184 LEEMRKAGFHADTVIYNAMIQGHCKSSHLQKASDVYSQMIAE 309
           L+EM K G  AD V YNA+I+G+C  SH++KA   YSQM  +
Sbjct: 438 LDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD 479


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/102 (48%), Positives = 77/102 (75%)
 Frame = +1

Query: 4   PTEIIHKLVLTAASEAKRADIIFMMHKKLVAMGLNLNLTVYSNLITILCGLKMTRRAASV 183
           P  +IH+++L A+S++ +A+ +  MH++LV MGL +N   Y+NLI + C L+MT++A SV
Sbjct: 655 PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSV 714

Query: 184 LEEMRKAGFHADTVIYNAMIQGHCKSSHLQKASDVYSQMIAE 309
           L+ M + GF ADTV YNA+I+G+C+SSH++KA   Y+QM+ E
Sbjct: 715 LKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNE 756


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