BLASTX nr result

ID: Salvia21_contig00029921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029921
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]   124   8e-27
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...   105   4e-21
ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15

>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/96 (65%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
 Frame = +3

Query: 96  AITSSSLHQTPPP---LSLAADKCQSMDQLKQIHAQMITTAQIQDAFAASRLINFCALSD 266
           +I +S LH  PPP    SL ADKC SM QLKQIHAQMI +A+I D +AASRL++FCALS+
Sbjct: 13  SILTSVLHPPPPPPPRFSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSE 72

Query: 267 SGDLSYALKLFADIPAPNTFIWNTLIRAHAISSNPA 374
           SGDLSYAL+LF +   PN+F+WNTLIRAHA S NP+
Sbjct: 73  SGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPS 108


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/98 (64%), Positives = 76/98 (77%), Gaps = 5/98 (5%)
 Frame = +3

Query: 96  AITSSSLHQTPPP-----LSLAADKCQSMDQLKQIHAQMITTAQIQDAFAASRLINFCAL 260
           +I +S LH  PPP      SL ADKC SM QLKQIHAQMI +A+I D +AASRL++FCAL
Sbjct: 13  SILTSVLHPPPPPPPPPRXSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCAL 72

Query: 261 SDSGDLSYALKLFADIPAPNTFIWNTLIRAHAISSNPA 374
           S+SGDLSYAL+LF +   PN+F+WNTLIRAHA S NP+
Sbjct: 73  SESGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPS 110


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/74 (68%), Positives = 61/74 (82%)
 Frame = +3

Query: 150 DKCQSMDQLKQIHAQMITTAQIQDAFAASRLINFCALSDSGDLSYALKLFADIPAPNTFI 329
           DKC SM QLKQIHAQMI T++I D FAASRL++FCALS+S D++YA+KLF  I  PN F+
Sbjct: 57  DKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRDINYAIKLFKSIQDPNIFM 116

Query: 330 WNTLIRAHAISSNP 371
           WNT+IRA A SSNP
Sbjct: 117 WNTIIRALANSSNP 130


>ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 465

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
 Frame = +3

Query: 114 LHQTPPPLSLAADKCQSMDQLKQIHAQMITTAQIQ-DAFAASRLINFCALSDSGDLSYAL 290
           L +T   L+L +DKC ++DQLKQ+HAQMI +A +  D FAASRL   CALS  GDLS A 
Sbjct: 14  LQRTLATLALISDKCTTLDQLKQVHAQMIVSAVVATDPFAASRLFFSCALSPFGDLSLAF 73

Query: 291 KLFADIPAPNTFIWNTLIRA-----HAIS 362
           ++F   P PN+F+WNTLIRA     HA+S
Sbjct: 74  RIFHSTPRPNSFMWNTLIRAQTHAPHALS 102


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/86 (52%), Positives = 58/86 (67%)
 Frame = +3

Query: 114 LHQTPPPLSLAADKCQSMDQLKQIHAQMITTAQIQDAFAASRLINFCALSDSGDLSYALK 293
           L Q  P L+L +  C+S   LKQIH+Q+I T      FA S+LI FCA+S  G+LSYAL 
Sbjct: 29  LLQNHPSLTLLST-CKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALL 87

Query: 294 LFADIPAPNTFIWNTLIRAHAISSNP 371
           LF  I  PN FIWNT+IR +++SS+P
Sbjct: 88  LFESIEQPNQFIWNTMIRGNSLSSSP 113


Top