BLASTX nr result

ID: Salvia21_contig00029768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029768
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332445.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                   73   3e-11
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    72   4e-11
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...    70   1e-10

>ref|XP_002332445.1| predicted protein [Populus trichocarpa] gi|222833061|gb|EEE71538.1|
           predicted protein [Populus trichocarpa]
          Length = 78

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/64 (65%), Positives = 44/64 (68%)
 Frame = +2

Query: 194 MDSNNWRTAQGQVQMPGQVIGGEAVPAGGMEGGDWRTQLQQDSRQRIVNKIMETLKRHLP 373
           MD+NNWR             GGE V    M+ GDWRTQLQ DSRQRIVNKIMETLKRHLP
Sbjct: 1   MDANNWRPTAP---------GGEPV----MDTGDWRTQLQPDSRQRIVNKIMETLKRHLP 47

Query: 374 FSGQ 385
           FSGQ
Sbjct: 48  FSGQ 51


>ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|222845463|gb|EEE83010.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/64 (64%), Positives = 44/64 (68%)
 Frame = +2

Query: 194 MDSNNWRTAQGQVQMPGQVIGGEAVPAGGMEGGDWRTQLQQDSRQRIVNKIMETLKRHLP 373
           MD+NNWR             GGE V    M+ GDWRTQLQ D+RQRIVNKIMETLKRHLP
Sbjct: 1   MDANNWRPTAP---------GGEPV----MDTGDWRTQLQPDARQRIVNKIMETLKRHLP 47

Query: 374 FSGQ 385
           FSGQ
Sbjct: 48  FSGQ 51


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/64 (59%), Positives = 43/64 (67%)
 Frame = +2

Query: 194 MDSNNWRTAQGQVQMPGQVIGGEAVPAGGMEGGDWRTQLQQDSRQRIVNKIMETLKRHLP 373
           MD+NNWR        P   +G        ++ GDWRTQLQ DSRQRIVNKIM+TLKRHLP
Sbjct: 16  MDTNNWR--------PTPPVG-----ESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLP 62

Query: 374 FSGQ 385
           FSGQ
Sbjct: 63  FSGQ 66


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/65 (66%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = +2

Query: 194 MDSNNWR-TAQGQVQMPGQVIGGEAVPAGGMEGGDWRTQLQQDSRQRIVNKIMETLKRHL 370
           MD+NNWR TAQG          GE  PA  ++ GDWR  LQ DSRQRIVNKIMETLKRHL
Sbjct: 1   MDTNNWRPTAQG----------GE--PA--VDTGDWRATLQPDSRQRIVNKIMETLKRHL 46

Query: 371 PFSGQ 385
           PFSGQ
Sbjct: 47  PFSGQ 51


>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/64 (59%), Positives = 40/64 (62%)
 Frame = +2

Query: 194 MDSNNWRTAQGQVQMPGQVIGGEAVPAGGMEGGDWRTQLQQDSRQRIVNKIMETLKRHLP 373
           MD+NNWR  Q                  GME  DWR+QLQ DSRQRIVNKIMETLKRHLP
Sbjct: 1   MDNNNWRPTQAVEP--------------GMETVDWRSQLQPDSRQRIVNKIMETLKRHLP 46

Query: 374 FSGQ 385
            SGQ
Sbjct: 47  VSGQ 50


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