BLASTX nr result

ID: Salvia21_contig00029375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029375
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...   239   3e-61
ref|XP_004159277.1| PREDICTED: glutamate receptor 2.7-like [Cucu...   238   8e-61
ref|XP_004138840.1| PREDICTED: glutamate receptor 2.7-like [Cucu...   238   8e-61
ref|XP_002324371.1| glutamate-gated kainate-type ion channel rec...   233   3e-59
ref|XP_002324364.1| glutamate-gated kainate-type ion channel rec...   232   5e-59

>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 866

 Score =  239 bits (611), Expect = 3e-61
 Identities = 122/218 (55%), Positives = 164/218 (75%), Gaps = 1/218 (0%)
 Frame = +3

Query: 33  LRIGKVLGCILQISHS*GMRCLSMALADFYSFHGDYKTRLVLHPMDSNGSVVDXXXXXLH 212
           + +G VL  +  +  +  + C++MAL+DFY+ HGDYKTRLVL+  DS   V+      L 
Sbjct: 13  VNVGVVLD-LASLEANIALSCINMALSDFYASHGDYKTRLVLNTRDSKKDVIGAAAAALD 71

Query: 213 LLRDVKVDAIIGPQTSAQVNFVMDLGDKAHVPIISFSATSPSLVH-QTPYFVQTAQNDAN 389
           L+++V+V AI+GP TS Q NFV+DLG+KA VPIISFSATSPSL   ++ YF++  QND+ 
Sbjct: 72  LIKNVEVQAILGPNTSMQANFVIDLGEKAQVPIISFSATSPSLTSIRSSYFLRATQNDSA 131

Query: 390 QVQAIASIVKAFLWTQVVVIYEDTEFGNGIMPYLSNTLQDVNARVPYRSVLPRSATDELI 569
           QV AI++IV+AF W + V IY D E+G GI+PYL++ LQ+V+ARVPYRSV+  SATD+ I
Sbjct: 132 QVNAISAIVQAFGWREAVPIYIDNEYGEGIIPYLTDALQEVDARVPYRSVISPSATDDQI 191

Query: 570 SNELYKMMTMQTRVFVVHMSQFLGTKLFLKARELGMMT 683
             ELYK+MTMQTRVF+VHM   LGT+LF KA+E+GMM+
Sbjct: 192 VEELYKLMTMQTRVFIVHMYPSLGTRLFTKAKEIGMMS 229


>ref|XP_004159277.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
          Length = 858

 Score =  238 bits (607), Expect = 8e-61
 Identities = 114/199 (57%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
 Frame = +3

Query: 87  MRCLSMALADFYSFHGDYKTRLVLHPMDSNGSVVDXXXXXLHLLRDVKVDAIIGPQTSAQ 266
           + C+SMAL+DFY+    +KTR+VL PMDSNG+VVD     L L++  +V AIIGP +S Q
Sbjct: 58  LSCISMALSDFYASRSHFKTRVVLKPMDSNGTVVDAAAAALELIKKEEVQAIIGPTSSMQ 117

Query: 267 VNFVMDLGDKAHVPIISFSATSPSLV-HQTPYFVQTAQNDANQVQAIASIVKAFLWTQVV 443
            NF++D+GDKAHVPIISFSAT PSL  H++P+F + AQ+D++QV+AI +IVK F W  VV
Sbjct: 118 ANFMIDIGDKAHVPIISFSATRPSLTSHRSPFFFRVAQDDSSQVKAIGAIVKTFKWRNVV 177

Query: 444 VIYEDTEFGNGIMPYLSNTLQDVNARVPYRSVLPRSATDELISNELYKMMTMQTRVFVVH 623
            IY D EFG+GI+PYL N LQ+VN  VPY+S++    TD+ +++ELYK+MTMQTRVFVVH
Sbjct: 178 PIYVDNEFGDGIIPYLINALQEVNTHVPYQSIISPDVTDDHLTSELYKLMTMQTRVFVVH 237

Query: 624 MSQFLGTKLFLKARELGMM 680
           M   L +++F+KA+++GMM
Sbjct: 238 MLPDLASRIFMKAKQIGMM 256


>ref|XP_004138840.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
          Length = 879

 Score =  238 bits (607), Expect = 8e-61
 Identities = 114/199 (57%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
 Frame = +3

Query: 87  MRCLSMALADFYSFHGDYKTRLVLHPMDSNGSVVDXXXXXLHLLRDVKVDAIIGPQTSAQ 266
           + C+SMAL+DFY+    +KTR+VL PMDSNG+VVD     L L++  +V AIIGP +S Q
Sbjct: 59  LSCISMALSDFYASRSHFKTRVVLKPMDSNGTVVDAAAAALELIKKEEVQAIIGPTSSMQ 118

Query: 267 VNFVMDLGDKAHVPIISFSATSPSLV-HQTPYFVQTAQNDANQVQAIASIVKAFLWTQVV 443
            NF++D+GDKAHVPIISFSAT PSL  H++P+F + AQ+D++QV+AI +IVK F W  VV
Sbjct: 119 ANFMIDIGDKAHVPIISFSATRPSLTSHRSPFFFRVAQDDSSQVKAIGAIVKTFKWRNVV 178

Query: 444 VIYEDTEFGNGIMPYLSNTLQDVNARVPYRSVLPRSATDELISNELYKMMTMQTRVFVVH 623
            IY D EFG+GI+PYL N LQ+VN  VPY+S++    TD+ +++ELYK+MTMQTRVFVVH
Sbjct: 179 PIYVDNEFGDGIIPYLINALQEVNTHVPYQSIISPDVTDDHLTSELYKLMTMQTRVFVVH 238

Query: 624 MSQFLGTKLFLKARELGMM 680
           M   L +++F+KA+++GMM
Sbjct: 239 MLPDLASRIFMKAKQIGMM 257


>ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865805|gb|EEF02936.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 883

 Score =  233 bits (593), Expect = 3e-59
 Identities = 117/218 (53%), Positives = 160/218 (73%), Gaps = 1/218 (0%)
 Frame = +3

Query: 33  LRIGKVLGCILQISHS*GMRCLSMALADFYSFHGDYKTRLVLHPMDSNGSVVDXXXXXLH 212
           + +G VL     +    G+ C++M+L+DFY  HGDYKTRLVL   DS   V       L 
Sbjct: 1   VNVGVVLDFDNDLDGKIGLSCINMSLSDFYDTHGDYKTRLVLITRDSKNDVAGAAAAALD 60

Query: 213 LLRDVKVDAIIGPQTSAQVNFVMDLGDKAHVPIISFSATSPSLVH-QTPYFVQTAQNDAN 389
           L+++V+V AIIGP TS Q NFV++LG+KA VPIISFSA+SPSL   ++P+F +  QND+ 
Sbjct: 61  LIKNVEVQAIIGPTTSMQANFVIELGEKAQVPIISFSASSPSLTSIRSPFFFRATQNDST 120

Query: 390 QVQAIASIVKAFLWTQVVVIYEDTEFGNGIMPYLSNTLQDVNARVPYRSVLPRSATDELI 569
           QV AI+++V+AF W +VV IY D E+G G++PYL++ LQ V+ARVPYRSV+  SATD+ I
Sbjct: 121 QVNAISALVQAFGWREVVPIYIDNEYGEGVIPYLTDALQAVDARVPYRSVISPSATDDQI 180

Query: 570 SNELYKMMTMQTRVFVVHMSQFLGTKLFLKARELGMMT 683
            +ELYK+MTMQTRVF+VHM   LG ++F KA+E+GM++
Sbjct: 181 VSELYKLMTMQTRVFIVHMFPSLGARVFAKAKEIGMVS 218


>ref|XP_002324364.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865798|gb|EEF02929.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 869

 Score =  232 bits (592), Expect = 5e-59
 Identities = 116/218 (53%), Positives = 159/218 (72%), Gaps = 1/218 (0%)
 Frame = +3

Query: 33  LRIGKVLGCILQISHS*GMRCLSMALADFYSFHGDYKTRLVLHPMDSNGSVVDXXXXXLH 212
           + +G VL     +    G+ C++M+L+DFY  HGDYKTRLVL   DS   V       L 
Sbjct: 1   MNVGVVLDFDNDLDGKIGLSCINMSLSDFYDTHGDYKTRLVLITRDSKNDVAGAAAAALD 60

Query: 213 LLRDVKVDAIIGPQTSAQVNFVMDLGDKAHVPIISFSATSPSLVH-QTPYFVQTAQNDAN 389
           L+++V+V AIIGP TS Q NFV++LGDKA VPI+SFSA+SPSL   ++P+F +  QND+ 
Sbjct: 61  LIKNVEVQAIIGPTTSMQANFVIELGDKAQVPILSFSASSPSLTSIRSPFFFRATQNDST 120

Query: 390 QVQAIASIVKAFLWTQVVVIYEDTEFGNGIMPYLSNTLQDVNARVPYRSVLPRSATDELI 569
           QV AI+++V+AF W + V IY D E+G G++PYL++ LQ V+ARVPYRSV+  SATD+ I
Sbjct: 121 QVNAISALVQAFGWREAVPIYIDNEYGQGVIPYLTDALQAVDARVPYRSVISPSATDDQI 180

Query: 570 SNELYKMMTMQTRVFVVHMSQFLGTKLFLKARELGMMT 683
            +ELYK+MTMQTRVF+VHM   LG ++F KA+E+GM++
Sbjct: 181 VSELYKLMTMQTRVFIVHMFPSLGARVFAKAKEIGMVS 218


Top