BLASTX nr result

ID: Salvia21_contig00029290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029290
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....    80   1e-13
ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...    77   1e-12
ref|NP_188076.1| pentatricopeptide repeat-containing protein [Ar...    77   2e-12
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]    72   4e-11

>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = +3

Query: 3   NPGTYQEVLYCLLDSNKYSEAXXXXXXXXXXXINPSFQSYKLVIQGFCGEKGVEDVEWAL 182
           N GTYQEVLY LLD+ K+ EA           ++PSF SYK ++ G C +K  EDV+W L
Sbjct: 302 NAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWVL 361

Query: 183 RHMLAHGFLPKMGMWNTM 236
           + M+  GF+PK+GMW  +
Sbjct: 362 KQMVMQGFVPKVGMWKVI 379


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/75 (49%), Positives = 46/75 (61%)
 Frame = +3

Query: 3   NPGTYQEVLYCLLDSNKYSEAXXXXXXXXXXXINPSFQSYKLVIQGFCGEKGVEDVEWAL 182
           NPGTYQEVLY LLD  +  EA           + PSF SYK ++ G C  K V +++W L
Sbjct: 306 NPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVAEMDWVL 365

Query: 183 RHMLAHGFLPKMGMW 227
           R M+ HGF+PK GMW
Sbjct: 366 RKMVNHGFVPKTGMW 380


>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/75 (50%), Positives = 47/75 (62%)
 Frame = +3

Query: 3   NPGTYQEVLYCLLDSNKYSEAXXXXXXXXXXXINPSFQSYKLVIQGFCGEKGVEDVEWAL 182
           N G+YQEVLY LLD+ K+SEA             PSF SYK +I G C EK + +V+  L
Sbjct: 242 NAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVDCVL 301

Query: 183 RHMLAHGFLPKMGMW 227
           + ML  GF+PKMGMW
Sbjct: 302 KQMLKQGFVPKMGMW 316


>ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g14580, mitochondrial; Flags: Precursor
           gi|9294380|dbj|BAB02390.1| unnamed protein product
           [Arabidopsis thaliana] gi|119935972|gb|ABM06049.1|
           At3g14580 [Arabidopsis thaliana]
           gi|332642020|gb|AEE75541.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 405

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/75 (48%), Positives = 45/75 (60%)
 Frame = +3

Query: 3   NPGTYQEVLYCLLDSNKYSEAXXXXXXXXXXXINPSFQSYKLVIQGFCGEKGVEDVEWAL 182
           NPGTYQEVLY LLD  +  EA           + PSF SYK ++ G C  K V +++W L
Sbjct: 306 NPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVL 365

Query: 183 RHMLAHGFLPKMGMW 227
           R M+ HGF+PK  MW
Sbjct: 366 RQMVNHGFVPKTLMW 380


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +3

Query: 3   NPGTYQEVLYCLLDSNKYSEAXXXXXXXXXXXINPSFQSYKLVIQGFCGEKGVEDVEWAL 182
           N G+YQEVLY +LD+ ++ +A           ++PSF SYK+VI G C E  V DV W L
Sbjct: 296 NAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLVADVVWIL 355

Query: 183 RHMLAHGFLPKMGMW 227
           + M+  GF+P+  MW
Sbjct: 356 KQMVEQGFVPERWMW 370


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