BLASTX nr result

ID: Salvia21_contig00029242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029242
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63495.1| hypothetical protein VITISV_011670 [Vitis vinifera]   113   1e-23
ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   112   2e-23
emb|CBI28180.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicag...   103   1e-20
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   102   2e-20

>emb|CAN63495.1| hypothetical protein VITISV_011670 [Vitis vinifera]
          Length = 757

 Score =  113 bits (283), Expect = 1e-23
 Identities = 70/148 (47%), Positives = 85/148 (57%), Gaps = 28/148 (18%)
 Frame = -3

Query: 511  AIDDYVHRIGRTGRAGQSGLATAFFSDKNLPIAKALVELMQEARQEVPTWLTEYAERPFD 332
            AIDDYVHRIGRTGRAG+SGLATAFF+D NL +AK+LVELMQE+ QEVP+WL +YAERP  
Sbjct: 612  AIDDYVHRIGRTGRAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQYAERPSY 671

Query: 331  GGSRS------------------SRHDYYRNDFVDDYSSQCGASVAPYSD--YFGV---- 224
            GG RS                   R DYY      D  +Q    VAP SD  Y+ +    
Sbjct: 672  GGGRSRYGGGRFGGHDFRSSSQLKREDYYSPSPYGDV-TQTDVFVAPASDEGYYSIPYGE 730

Query: 223  ----STSSDGATTYVTDSYDQVTAGGWD 152
                 + + G+  Y  D +  + A GWD
Sbjct: 731  AAPPDSYAAGSDRYGFD-HGSIVASGWD 757


>ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 615

 Score =  112 bits (281), Expect = 2e-23
 Identities = 71/148 (47%), Positives = 84/148 (56%), Gaps = 28/148 (18%)
 Frame = -3

Query: 511 AIDDYVHRIGRTGRAGQSGLATAFFSDKNLPIAKALVELMQEARQEVPTWLTEYAERPFD 332
           AIDDYVHRIGRTGRAG+SGLATAFF+D NL +AK+LVELMQE+ QEVP+WL +YAERP  
Sbjct: 470 AIDDYVHRIGRTGRAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQYAERPSY 529

Query: 331 GGSRS------------------SRHDYYRNDFVDDYSSQCGASVAP------YSDYFGV 224
           GG RS                   R DYY      D  +Q    VAP      YS  +G 
Sbjct: 530 GGGRSRYGGGRFGGHDFRSSSQLKREDYYSPSPYGDV-TQTDVFVAPASGEGYYSIPYGE 588

Query: 223 STSSD----GATTYVTDSYDQVTAGGWD 152
           +   D    G+  Y  D +  + A GWD
Sbjct: 589 AAPPDSYAAGSDRYGFD-HGSIVASGWD 615


>emb|CBI28180.3| unnamed protein product [Vitis vinifera]
          Length = 916

 Score =  109 bits (273), Expect = 2e-22
 Identities = 60/111 (54%), Positives = 73/111 (65%), Gaps = 9/111 (8%)
 Frame = -3

Query: 511  AIDDYVHRIGRTGRAGQSGLATAFFSDKNLPIAKALVELMQEARQEVPTWLTEYAERPFD 332
            AIDDYVHRIGRTGRAG+SGLATAFF+D NL +AK+LVELMQE+ QEVP+WL +YAERP  
Sbjct: 758  AIDDYVHRIGRTGRAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQYAERPSY 817

Query: 331  GGSRS-------SRHDYYRNDFV--DDYSSQCGASVAPYSDYFGVSTSSDG 206
            GG RS         HD+  +  +  +DY S         +D F    S +G
Sbjct: 818  GGGRSRYGGGRFGGHDFRSSSQLKREDYYSPSPYGDVTQTDVFVAPASGEG 868


>ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355510349|gb|AES91491.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 671

 Score =  103 bits (257), Expect = 1e-20
 Identities = 77/191 (40%), Positives = 98/191 (51%), Gaps = 36/191 (18%)
 Frame = -3

Query: 508  IDDYVHRIGRTGRAGQSGLATAFFSDKNLPIAKALVELMQEARQEVPTWLTEYAERPFDG 329
            IDDYVHRIGRTGRAGQSGLATAFFS KN+P+AK+LV L+QEA+QEVP WL +Y+E    G
Sbjct: 482  IDDYVHRIGRTGRAGQSGLATAFFSTKNMPMAKSLVGLLQEAKQEVPAWLVQYSECSAPG 541

Query: 328  GSRSS--------RHDYYRNDF--------VDDYSSQCGASVAPYSD------------- 236
            G RSS        R +Y   DF        V++Y+S   ++ + Y D             
Sbjct: 542  G-RSSVGSQRSPWRGNYGGRDFRNATEPGMVENYNSY-NSNYSNYGDNGYHNVPEQVQNY 599

Query: 235  -YFGVSTSSDGATTYVTDSYDQVTAGGWDC*VFPLLPL----FSFDELRLTYLSRG--WP 77
             Y G   + D A    TD+   VT    DC       +    F++ +  L   S G   P
Sbjct: 600  NYNGTYNNGDHAANSYTDASLDVTNSNNDCSFDNTNTVVAGGFNYTDAGLLEGSDGTNGP 659

Query: 76   CAYACLTQLIW 44
            C YA +    W
Sbjct: 660  CGYASVVPTGW 670


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/125 (48%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
 Frame = -3

Query: 508 IDDYVHRIGRTGRAGQSGLATAFFSDKNLPIAKALVELMQEARQEVPTWLTEYAERPFDG 329
           IDDYVHRIGRTGRAG+ GLATAFF+D N  +A+AL ELMQEA QEVP WL+ YA R   G
Sbjct: 500 IDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQEANQEVPAWLSRYAARSSFG 559

Query: 328 GSRSSRHD--YYRNDFVDDYSSQCGASVAPYSDYFGVSTSS----DGATTYVTDSYDQVT 167
           G R+ R    +   DF  + S   G+     SDY+    SS     G+  Y    Y    
Sbjct: 560 GGRNRRSGGRFGSRDFRREGSFSRGS-----SDYYSAGNSSGGGYGGSGGYAGGGYGPGV 614

Query: 166 AGGWD 152
              WD
Sbjct: 615 TSAWD 619


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