BLASTX nr result

ID: Salvia21_contig00029072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029072
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [...   106   2e-21
prf||1211235BY ORF 581                                                105   5e-21
ref|NP_054542.1| Ycf2 [Nicotiana tabacum] gi|11466033|ref|NP_054...   105   5e-21
ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|re...   103   1e-20
ref|NP_783294.1| Ycf2 [Atropa belladonna] gi|47117596|sp|Q8S8U1....   103   1e-20

>ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
           gi|459014556|ref|YP_007507174.1| hypothetical
           chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
           gi|401879785|gb|AFQ30972.1| hypothetical chloroplast RF2
           (chloroplast) [Salvia miltiorrhiza]
           gi|401879806|gb|AFQ30993.1| hypothetical chloroplast RF2
           (chloroplast) [Salvia miltiorrhiza]
          Length = 2283

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = +2

Query: 2   FIGNPTRSVRSFFSDRWSELRLGSNPTERSTRDQKLLKKQQDLSFVPSKGLEDKESFN 175
           FIGNPTRSVRSFFSDRWSELRLGSNPTERSTRDQKLLKKQQDLSFVPS+  E+KE  N
Sbjct: 483 FIGNPTRSVRSFFSDRWSELRLGSNPTERSTRDQKLLKKQQDLSFVPSRRSENKELVN 540


>prf||1211235BY ORF 581
          Length = 581

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = +2

Query: 2   FIGNPTRSVRSFFSDRWSELRLGSNPTERSTRDQKLLKKQQDLSFVPSKGLEDKESFN 175
           F+GNPTRSVRSFFSDRWSEL LGSNPTERSTRDQKLLKKQQDLSFVPSK  E+KE  N
Sbjct: 483 FLGNPTRSVRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDLSFVPSKRSENKEMVN 540


>ref|NP_054542.1| Ycf2 [Nicotiana tabacum] gi|11466033|ref|NP_054575.1| Ycf2
           [Nicotiana tabacum] gi|78102582|ref|YP_358722.1| Ycf2
           [Nicotiana sylvestris] gi|78102617|ref|YP_358756.1| Ycf2
           [Nicotiana sylvestris] gi|3915961|sp|P09976.2|YCF2_TOBAC
           RecName: Full=Protein ycf2
           gi|109896302|sp|Q3C1N4.1|YCF2_NICSY RecName:
           Full=Protein ycf2 gi|2924274|emb|CAA77427.1| Ycf2
           protein [Nicotiana tabacum] gi|2924285|emb|CAA77438.1|
           Ycf2 protein [Nicotiana tabacum]
           gi|77799609|dbj|BAE46698.1| Ycf2 protein [Nicotiana
           sylvestris] gi|77799644|dbj|BAE46733.1| Ycf2 protein
           [Nicotiana sylvestris]
          Length = 2280

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = +2

Query: 2   FIGNPTRSVRSFFSDRWSELRLGSNPTERSTRDQKLLKKQQDLSFVPSKGLEDKESFN 175
           F+GNPTRSVRSFFSDRWSEL LGSNPTERSTRDQKLLKKQQDLSFVPSK  E+KE  N
Sbjct: 483 FLGNPTRSVRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDLSFVPSKRSENKEMVN 540


>ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|ref|YP_398942.1| Ycf2
           [Nicotiana tomentosiformis]
           gi|109896303|sp|Q33BV3.1|YCF2_NICTO RecName:
           Full=Protein ycf2 gi|80750971|dbj|BAE48047.1| Ycf2
           protein [Nicotiana tomentosiformis]
           gi|80751006|dbj|BAE48082.1| Ycf2 protein [Nicotiana
           tomentosiformis]
          Length = 2280

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/58 (86%), Positives = 53/58 (91%)
 Frame = +2

Query: 2   FIGNPTRSVRSFFSDRWSELRLGSNPTERSTRDQKLLKKQQDLSFVPSKGLEDKESFN 175
           F+GNPTRSVRSFFSDRWSEL LGSNPTERSTRDQKLLKKQQDLSFVPS+  E+KE  N
Sbjct: 483 FLGNPTRSVRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVN 540


>ref|NP_783294.1| Ycf2 [Atropa belladonna] gi|47117596|sp|Q8S8U1.1|YCF2B_ATRBE
           RecName: Full=Protein ycf2 B gi|20068395|emb|CAC88108.1|
           ycf2 protein [Atropa belladonna]
          Length = 2291

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/58 (86%), Positives = 53/58 (91%)
 Frame = +2

Query: 2   FIGNPTRSVRSFFSDRWSELRLGSNPTERSTRDQKLLKKQQDLSFVPSKGLEDKESFN 175
           F+GNPTRSVRSFFSDRWSEL LGSNPTERSTRDQKLLKKQQDLSFVPS+  E+KE  N
Sbjct: 483 FLGNPTRSVRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVN 540


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