BLASTX nr result

ID: Salvia21_contig00029008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00029008
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374...   120   3e-25
ref|YP_740506.1| cytochrome b6 [Citrus sinensis] gi|113952651|gb...   114   2e-24
gb|ABU85327.1| cytochrome b6 [Elaeis oleifera]                        114   3e-24
gb|AAZ04013.1| cytochrome b6 [Typha latifolia]                        114   4e-24
ref|YP_874682.1| cytochrome b6 [Hordeum vulgare subsp. vulgare] ...   115   6e-24

>ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374093729|gb|AEY84165.1|
           cytochrome b6 (chloroplast) [Vaccinium macrocarpon]
           gi|385198157|gb|AFI44075.1| cytochrome b6 [Vaccinium
           macrocarpon]
          Length = 226

 Score =  120 bits (302), Expect = 3e-25
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +1

Query: 652 IYGSKGGIFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 831
           +YGS+ G  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA
Sbjct: 1   MYGSRRGSLTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 60

Query: 832 T 834
           T
Sbjct: 61  T 61


>ref|YP_740506.1| cytochrome b6 [Citrus sinensis] gi|113952651|gb|ABI49049.1|
           cytochrome b6 [Citrus sinensis]
          Length = 234

 Score =  114 bits (286), Expect(2) = 2e-24
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +1

Query: 676 FTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 834
           FTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT
Sbjct: 17  FTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 69



 Score = 24.6 bits (52), Expect(2) = 2e-24
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +2

Query: 641 MKVSYTVLRGGFS 679
           MK SYTVLRG FS
Sbjct: 3   MKFSYTVLRGEFS 15


>gb|ABU85327.1| cytochrome b6 [Elaeis oleifera]
          Length = 232

 Score =  114 bits (285), Expect(2) = 3e-24
 Identities = 55/59 (93%), Positives = 56/59 (94%), Gaps = 2/59 (3%)
 Frame = +1

Query: 664 KGGI--FTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 834
           +GGI   TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT
Sbjct: 9   RGGIPLITYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 67



 Score = 24.3 bits (51), Expect(2) = 3e-24
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 641 MKVSYTVLRGGFSPIS 688
           MK SYTVLRGG   I+
Sbjct: 1   MKFSYTVLRGGIPLIT 16


>gb|AAZ04013.1| cytochrome b6 [Typha latifolia]
          Length = 232

 Score =  114 bits (284), Expect(2) = 4e-24
 Identities = 54/59 (91%), Positives = 56/59 (94%), Gaps = 2/59 (3%)
 Frame = +1

Query: 664 KGGI--FTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 834
           +GG+   TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT
Sbjct: 9   RGGVPLITYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 67



 Score = 23.9 bits (50), Expect(2) = 4e-24
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 641 MKVSYTVLRGG 673
           MK SYTVLRGG
Sbjct: 1   MKFSYTVLRGG 11


>ref|YP_874682.1| cytochrome b6 [Hordeum vulgare subsp. vulgare]
           gi|118201070|gb|ABK79441.1| cytochrome b6 [Hordeum
           vulgare subsp. vulgare]
          Length = 234

 Score =  115 bits (287), Expect(2) = 6e-24
 Identities = 53/55 (96%), Positives = 54/55 (98%)
 Frame = +1

Query: 670 GIFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 834
           G+ TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT
Sbjct: 15  GLVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVAT 69



 Score = 22.3 bits (46), Expect(2) = 6e-24
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 641 MKVSYTVLRGG 673
           MK SYT LRGG
Sbjct: 3   MKFSYTALRGG 13


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