BLASTX nr result

ID: Salvia21_contig00027903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027903
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containi...   104   7e-21
emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]   104   7e-21
ref|XP_002511861.1| pentatricopeptide repeat-containing protein,...    97   2e-18
ref|NP_193861.1| pentatricopeptide repeat-containing protein [Ar...    78   9e-13
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ...    77   1e-12

>ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 804

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/115 (43%), Positives = 78/115 (67%)
 Frame = -2

Query: 348 LKMGREIHGYSIKRSFYHHTVLHNSILDMYSKCRHLEAALDVFERMQNKDVVSWRIMIRG 169
           L  G+EIHG+SIK+ F+  T +HNS++DMY+KCR+ +A++ VF+++  KD++SW  +IRG
Sbjct: 126 LLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRG 185

Query: 168 CVENERPGKALEIFLELLACCGENVDERIIQEVIGAYKQLDENYCRHGFHSLVLK 4
           C+EN+ P +A + F  +   C    DE I+Q++I A  Q DE+     FH  +LK
Sbjct: 186 CIENDCPREAFKAFSRMQFSC-FGADETIVQDLIVAIIQADEHKFGIAFHGFLLK 239


>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/115 (43%), Positives = 78/115 (67%)
 Frame = -2

Query: 348 LKMGREIHGYSIKRSFYHHTVLHNSILDMYSKCRHLEAALDVFERMQNKDVVSWRIMIRG 169
           L  G+EIHG+SIK+ F+  T +HNS++DMY+KCR+ +A++ VF+++  KD++SW  +IRG
Sbjct: 205 LLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRG 264

Query: 168 CVENERPGKALEIFLELLACCGENVDERIIQEVIGAYKQLDENYCRHGFHSLVLK 4
           C+EN+ P +A + F  +   C    DE I+Q++I A  Q DE+     FH  +LK
Sbjct: 265 CIENDCPREAFKAFSRMQFSC-FGADETIVQDLIVAIIQADEHKFGIAFHGFLLK 318


>ref|XP_002511861.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549041|gb|EEF50530.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 751

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/111 (45%), Positives = 73/111 (65%)
 Frame = -2

Query: 336 REIHGYSIKRSFYHHTVLHNSILDMYSKCRHLEAALDVFERMQNKDVVSWRIMIRGCVEN 157
           +EIHG+ +K+ FY  TV+ NS++D Y+KC  +EA+  +F R+  KD++SWR +IR CVEN
Sbjct: 130 KEIHGFCLKKVFYSFTVVQNSLMDAYAKCGKIEASFYIFNRICEKDLISWRTVIRICVEN 189

Query: 156 ERPGKALEIFLELLACCGENVDERIIQEVIGAYKQLDENYCRHGFHSLVLK 4
           E P +AL+IFL++     E  DE II++ I A  Q  E     GFH+ + K
Sbjct: 190 ECPREALDIFLKMQRSTTE-ADEIIIRDTIMASIQAKELKFGLGFHAYIEK 239


>ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g21300 gi|3402749|emb|CAA20195.1| putative protein
           [Arabidopsis thaliana] gi|7268926|emb|CAB79129.1|
           putative protein [Arabidopsis thaliana]
           gi|332659037|gb|AEE84437.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 30/77 (38%), Positives = 53/77 (68%)
 Frame = -2

Query: 348 LKMGREIHGYSIKRSFYHHTVLHNSILDMYSKCRHLEAALDVFERMQNKDVVSWRIMIRG 169
           LK+GRE+HG+ IK+ F +   +  +++DMY+KC  +  A ++FER+  +D+VSW  MI  
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516

Query: 168 CVENERPGKALEIFLEL 118
           C +++ P  A++IF ++
Sbjct: 517 CAQSDNPSAAIDIFRQM 533



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/93 (33%), Positives = 56/93 (60%)
 Frame = -2

Query: 339 GREIHGYSIKRSFYHHTVLHNSILDMYSKCRHLEAALDVFERMQNKDVVSWRIMIRGCVE 160
           G+ IHG+ IK S        ++++DMY+KC +L+AA++VF+ M+ K++VSW  +I  C  
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620

Query: 159 NERPGKALEIFLELLACCGENVDERIIQEVIGA 61
           + +   +L +F E++   G   D+    E+I +
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653


>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331463|gb|EFH61882.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/115 (35%), Positives = 65/115 (56%)
 Frame = -2

Query: 348 LKMGREIHGYSIKRSFYHHTVLHNSILDMYSKCRHLEAALDVFERMQNKDVVSWRIMIRG 169
           L  GR +HG+ I+  F H  V++N++L+MY+KC  LE A  VF++M  +D V+W  +I G
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 168 CVENERPGKALEIFLELLACCGENVDERIIQEVIGAYKQLDENYCRHGFHSLVLK 4
             +++RP  AL +F ++L   G + +E  +  VI A        C H  H   +K
Sbjct: 127 YSQHDRPFDALVLFNQMLR-FGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 180


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