BLASTX nr result

ID: Salvia21_contig00027891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027891
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    99   5e-19
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...    96   4e-18
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...    93   2e-17
gb|AAF75078.1|AC007583_14 Contains similarity to DNA repair prot...    92   3e-17

>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/68 (72%), Positives = 54/68 (79%)
 Frame = +1

Query: 1   QLNKCTLSTGCERIDVLLQGGLREGHVTELVGPSCSGKTQVCLKAASHVARNSLGKVVYF 180
           Q NK  LSTGCE ID+LLQGGL  GH+TELVGPS SGKTQ+CLK AS VA   +G VV+ 
Sbjct: 83  QQNKQVLSTGCEGIDMLLQGGLCVGHLTELVGPSSSGKTQICLKVASGVATRYMGGVVFI 142

Query: 181 DTGNSFSP 204
           DTGNSFSP
Sbjct: 143 DTGNSFSP 150


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/68 (69%), Positives = 53/68 (77%)
 Frame = +1

Query: 1   QLNKCTLSTGCERIDVLLQGGLREGHVTELVGPSCSGKTQVCLKAASHVARNSLGKVVYF 180
           Q NK  LSTGCE ID+LL GGL  GH+TELVGPS +GKTQ+CLK AS VA   +G VV+ 
Sbjct: 83  QQNKQVLSTGCEGIDMLLHGGLCVGHLTELVGPSSAGKTQICLKVASGVATRYMGGVVFI 142

Query: 181 DTGNSFSP 204
           DTGNSFSP
Sbjct: 143 DTGNSFSP 150


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/68 (69%), Positives = 53/68 (77%)
 Frame = +1

Query: 1   QLNKCTLSTGCERIDVLLQGGLREGHVTELVGPSCSGKTQVCLKAASHVARNSLGKVVYF 180
           Q NK  LSTGCE ID+LL GGL  GH+TELVGPS +GKTQ+CLK AS VA   +G VV+ 
Sbjct: 135 QQNKQVLSTGCEGIDMLLHGGLCVGHLTELVGPSSAGKTQICLKVASGVATRYMGGVVFI 194

Query: 181 DTGNSFSP 204
           DTGNSFSP
Sbjct: 195 DTGNSFSP 202


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/67 (68%), Positives = 54/67 (80%)
 Frame = +1

Query: 7   NKCTLSTGCERIDVLLQGGLREGHVTELVGPSCSGKTQVCLKAASHVARNSLGKVVYFDT 186
           NK  LS G E +DVLL GGLREG +TE+VGPS SGKTQVCL+AAS+VA+N   +V Y DT
Sbjct: 86  NKNILSIGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYKAEVFYMDT 145

Query: 187 GNSFSPK 207
           GNSFSP+
Sbjct: 146 GNSFSPQ 152


>gb|AAF75078.1|AC007583_14 Contains similarity to DNA repair protein RAD51 homolog 4 (TRAD)
           from Homo sapiens gi|6174940 [Arabidopsis thaliana]
          Length = 285

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = +1

Query: 7   NKCTLSTGCERIDVLLQGGLREGHVTELVGPSCSGKTQVCLKAASHVARNSLGKVVYFDT 186
           NK TLSTG +  D LLQGG REG +TELVGPS SGKTQ C++AA+ VA N LG+V+Y DT
Sbjct: 63  NKHTLSTGDKETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDT 122

Query: 187 GNSFSPK 207
           GNSFS +
Sbjct: 123 GNSFSAR 129


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