BLASTX nr result

ID: Salvia21_contig00027805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027805
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]   132   4e-29
ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...   104   9e-21
ref|XP_002893429.1| pentatricopeptide repeat-containing protein ...   103   2e-20

>emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
          Length = 833

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/97 (61%), Positives = 76/97 (78%)
 Frame = -2

Query: 292 LNLGQQIHAEAIKVGIDCFTAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNSVICG 113
           L+LG+QIHA+  K G + F A  NA +T+Y RCGN NSALL F SM  HD ISWNS+ICG
Sbjct: 556 LHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSSMTSHDVISWNSIICG 615

Query: 112 LAQHGLGEKAVEVFEKMRLSRVEPNKITFVGILSACS 2
           LA +G G +A+E+FEKMR + ++PN+ITFVG+LSACS
Sbjct: 616 LAHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSACS 652



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/78 (33%), Positives = 44/78 (56%)
 Frame = -2

Query: 235 TAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNSVICGLAQHGLGEKAVEVFEKMRL 56
           T +    I  YF  G +++A+  F+ M   DA +WN +I GL ++  GE+ ++ F KM+ 
Sbjct: 474 TVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKE 533

Query: 55  SRVEPNKITFVGILSACS 2
               P++ TF  +L+ CS
Sbjct: 534 GGPFPDEATFTSVLTICS 551


>ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 691

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/97 (61%), Positives = 74/97 (76%)
 Frame = -2

Query: 292 LNLGQQIHAEAIKVGIDCFTAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNSVICG 113
           L+LG+QIHA+  K G + F A  NA +T+Y RCGN NSALL F +M  HD ISWNS+ICG
Sbjct: 402 LHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSIICG 461

Query: 112 LAQHGLGEKAVEVFEKMRLSRVEPNKITFVGILSACS 2
           LA +G G +A+EVFEKMR   ++PN ITFVG+LSACS
Sbjct: 462 LAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACS 498



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/78 (33%), Positives = 44/78 (56%)
 Frame = -2

Query: 235 TAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNSVICGLAQHGLGEKAVEVFEKMRL 56
           T +    I  YF  G +++A+  F+ M   DA +WN +I GL ++  GE+ ++ F KM+ 
Sbjct: 320 TVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKE 379

Query: 55  SRVEPNKITFVGILSACS 2
               P++ TF  +L+ CS
Sbjct: 380 GGPFPDEATFTSVLTICS 397


>ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
           gi|449487596|ref|XP_004157705.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 675

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/97 (60%), Positives = 72/97 (74%)
 Frame = -2

Query: 292 LNLGQQIHAEAIKVGIDCFTAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNSVICG 113
           L LG+Q HA  +K G + F A  NA I MY RCGNM+ A +EF SM+  D ISWNS+ICG
Sbjct: 407 LQLGRQTHALILKEGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICG 466

Query: 112 LAQHGLGEKAVEVFEKMRLSRVEPNKITFVGILSACS 2
            A HG GE A+E+FEKMRL+ +EPN ITF+G+LSACS
Sbjct: 467 FAHHGNGEDALEMFEKMRLANIEPNHITFIGVLSACS 503


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/97 (48%), Positives = 69/97 (71%)
 Frame = -2

Query: 292 LNLGQQIHAEAIKVGIDCFTAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNSVICG 113
           L  G+Q+HA+ ++ G D   +AGNA ITMY RCG + +A   F SM C D++SWN++I  
Sbjct: 445 LEHGRQLHAQLVRFGFDSSLSAGNALITMYARCGVVEAARTLFLSMPCVDSVSWNAMIAA 504

Query: 112 LAQHGLGEKAVEVFEKMRLSRVEPNKITFVGILSACS 2
           L QHG G +A+E+FE+M +  + P++ITF+ +LSACS
Sbjct: 505 LGQHGYGVQAIELFEEMLIEGILPDRITFLTVLSACS 541



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 35/132 (26%)
 Frame = -2

Query: 292 LNLGQQIHAEAIKVGI----DCFTAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNS 125
           L  G+Q+HA  +K       D      NA +T+Y++CG ++ A   F +M   D +SWN+
Sbjct: 309 LQHGKQVHAYILKTEAMPSPDFSLPVNNALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNT 368

Query: 124 V-------------------------------ICGLAQHGLGEKAVEVFEKMRLSRVEPN 38
           +                               I GLAQ+G GE+ +++F +M+L   EP 
Sbjct: 369 ILSGYLNAGRMDEAKTFFEEMPEKNILSWVVMISGLAQNGFGEEGLKLFNQMKLRGFEPC 428

Query: 37  KITFVGILSACS 2
              F G +++CS
Sbjct: 429 DYAFAGAITSCS 440


>ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339271|gb|EFH69688.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 790

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/94 (47%), Positives = 67/94 (71%)
 Frame = -2

Query: 283 GQQIHAEAIKVGIDCFTAAGNAFITMYFRCGNMNSALLEFKSMACHDAISWNSVICGLAQ 104
           GQQ HA+ +K+G D   +AGNA ITMY +CG +  A   F++M C D++SWN++I  L Q
Sbjct: 436 GQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQ 495

Query: 103 HGLGEKAVEVFEKMRLSRVEPNKITFVGILSACS 2
           HG G +AV+V+E+M    + P++ITF+ +L+ACS
Sbjct: 496 HGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACS 529


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