BLASTX nr result

ID: Salvia21_contig00027756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027756
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17393.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containin...    66   3e-09
ref|XP_004135031.1| PREDICTED: zinc finger CCCH domain-containin...    62   6e-08
ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin...    61   8e-08

>emb|CBI17393.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = -3

Query: 277 LQYHKSLIKH--GKIHETEKDKVPKICQSGNYLQGLEQAHKITKIETNPKYWKPCLYFTS 104
           + Y+KSL+K   G+   T+   +P+     NYLQG+E        E  PK  K C+++ S
Sbjct: 346 VNYYKSLVKQHGGEKQGTQDQIIPQYANHENYLQGMELIQNFKPTELKPKSQKSCIFYNS 405

Query: 103 SRGCRNGHNCPFQHDVPKQWRATSAVE 23
             GCRNG NCP+QHD   Q R  S +E
Sbjct: 406 PTGCRNGTNCPYQHDTFSQLRCGSMLE 432


>ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|222836848|gb|EEE75241.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = -3

Query: 277 LQYHKSLIKHGKIHETEKDKVP-KICQSGNYLQGLEQAHKITKIETNPKYWKPCLYFTSS 101
           ++Y K+LI+    H T K ++  +  +  N  Q  E    I K E+  K  KPC+YF + 
Sbjct: 437 VEYIKNLIRE---HGTAKKEIQDRNGRHYNQTQNQELIQNIKKRESKHKSQKPCMYFKTP 493

Query: 100 RGCRNGHNCPFQHDVPKQWRATSAVEAPI 14
           +GCRNG NCPFQHD   Q++  SA++AP+
Sbjct: 494 KGCRNGFNCPFQHDPSFQFQTGSALDAPV 522


>ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Glycine max]
          Length = 520

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -3

Query: 271 YHKSLIK-HGKIHETEKDKVPKICQSGNYLQGLEQAHKITKIETNPKYWKPCLYFTSSRG 95
           Y+K+LI+ HG   +  +D    I  S    Q ++  H I + E  PK  KPC+YF S RG
Sbjct: 426 YYKNLIRQHGADKQDIQDSHIGIRHSN--FQDMKPVHNIKQREVKPKILKPCIYFKSPRG 483

Query: 94  CRNGHNCPFQHDVPKQWRATSAVEA 20
           CRNG NC +QHDV  Q  A + + A
Sbjct: 484 CRNGSNCSYQHDVSAQEGAGNVLRA 508


>ref|XP_004135031.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Cucumis sativus] gi|449491466|ref|XP_004158907.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           6-like [Cucumis sativus]
          Length = 462

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = -3

Query: 277 LQYHKSLIK-HGKIHETEKDKVPKICQSGNYL---QGLEQAHKITKIETNPKYWKPCLYF 110
           + Y+K+L++ HG   + +K K+ +  Q GN +     L  AH++ +    PK  K C+YF
Sbjct: 368 VSYYKNLVREHGDQRDFKKQKLGQ--QDGNNIYNHHNLNMAHEMKEENLKPKIQKQCIYF 425

Query: 109 TSSRGCRNGHNCPFQHDV 56
             S+GCRNG NC F+HD+
Sbjct: 426 NGSKGCRNGLNCQFKHDI 443


>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
           vinifera]
          Length = 457

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
 Frame = -3

Query: 277 LQYHKSLIK-HGKIHETEKDKVPKICQSGN----YLQGLEQAHKITKI---ETNPKYWKP 122
           + Y+KSLI+ HG   +  +D+     Q  N    ++ G+     +T     ++ PK  KP
Sbjct: 349 INYYKSLIQQHGGERQEPQDQSQSHSQFANRPNHHVLGMNPETVVTHPKPRDSKPKIMKP 408

Query: 121 CLYFTSSRGCRNGHNCPFQHDVPKQWRATSAVE 23
           C+YF SSRGCR+G NC +QHD   Q R +S  E
Sbjct: 409 CIYFHSSRGCRHGANCSYQHDASLQQRVSSMPE 441


Top