BLASTX nr result

ID: Salvia21_contig00027558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027558
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyr...    75   4e-12
ref|NP_186795.1| methyl-CPG-binding domain 9 [Arabidopsis thalia...    74   9e-12
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    69   5e-10
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    63   2e-08
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...    59   5e-07

>ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyrata subsp. lyrata]
           gi|297330119|gb|EFH60538.1| methyl-CpG-binding domain 9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2183

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/85 (44%), Positives = 51/85 (60%)
 Frame = -2

Query: 267 FAARLRASHTPPEFPPASPNVLYLQTLREYIAERSGTLGEGWRVEFEFCDKEYKTSAVYI 88
           F   L  S  P  FP   P+ L+LQ LR +I+ER G L +GWRVEF+     Y+  AVY 
Sbjct: 231 FPLSLNNSSLPMRFPSLDPSELFLQNLRHFISERHGVLEDGWRVEFKQPLNGYQLCAVYC 290

Query: 87  APDGSRFRSMEDVAFHFGLSSRYHY 13
           AP+G  F S++DVA + GL+   +Y
Sbjct: 291 APNGKTFSSIQDVACYLGLAVNGNY 315


>ref|NP_186795.1| methyl-CPG-binding domain 9 [Arabidopsis thaliana]
           gi|75337201|sp|Q9SGH2.1|MBD9_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 9;
           Short=AtMBD9; Short=MBD09; AltName: Full=Histone acetyl
           tranferase MBD9; AltName: Full=Methyl-CpG-binding
           protein MBD9 gi|6692266|gb|AAF24616.1|AC010870_9 unknown
           protein [Arabidopsis thaliana]
           gi|332640148|gb|AEE73669.1| methyl-CPG-binding domain 9
           [Arabidopsis thaliana]
          Length = 2176

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/94 (41%), Positives = 54/94 (57%)
 Frame = -2

Query: 294 LGTIHKESTFAARLRASHTPPEFPPASPNVLYLQTLREYIAERSGTLGEGWRVEFEFCDK 115
           LG+ +    F   L  S  P  FP   P+ L+LQ LR +I+ER G L +GWRVEF     
Sbjct: 222 LGSHNLGFGFPLNLNNSSLPMRFPSLDPSELFLQNLRHFISERHGVLEDGWRVEFRQPLN 281

Query: 114 EYKTSAVYIAPDGSRFRSMEDVAFHFGLSSRYHY 13
            Y+  AVY AP+G  F S+++VA + GL+   +Y
Sbjct: 282 GYQLCAVYCAPNGKTFSSIQEVACYLGLAINGNY 315


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = -2

Query: 258 RLRASH-TPPEFPPASPNVLYLQTLREYIAERSGTLGEGWRVEFEFCDKEYKTSAVYIAP 82
           RLR+S+ T    PP  P+ + LQ L+E+I+ER G L EGWRVE +   +  +   V+ AP
Sbjct: 225 RLRSSNNTACRLPPQEPSEMLLQALKEFISERHGVLEEGWRVELKQSVRAGELCPVFCAP 284

Query: 81  DGSRFRSMEDVAFHFGLSS 25
           DG  F SM +VA + GL+S
Sbjct: 285 DGRIFESMSEVAVYLGLTS 303


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
           gi|223543360|gb|EEF44891.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2145

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -2

Query: 258 RLRASH-TPPEFPPASPNVLYLQTLREYIAERSGTLGEGWRVEFEFCDKEYKTSAVYIAP 82
           R R+S+ T  + P  SPN + LQ LRE+I+ER G L EGW VE +      +    Y +P
Sbjct: 250 RFRSSNSTANKLPSRSPNEILLQGLREFISERHGILDEGWHVELKNSVSGCEVFVAYCSP 309

Query: 81  DGSRFRSMEDVAFHFGLS 28
           DG  F SM +VA + GL+
Sbjct: 310 DGKTFGSMAEVACYLGLT 327


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -2

Query: 204 LYLQTLREYIAERSGTLGEGWRVEFEFCDKEYKTSAVYIAPDGSRFRSMEDVAFHFGLSS 25
           ++LQ LRE+I+ER+G L EGW VE +      +  A+Y APDG  F S+ +VA H GL S
Sbjct: 372 VFLQALREFISERNGVLEEGWCVEIKQSVDSSELYAIYRAPDGKTFGSVYEVACHLGLMS 431


Top