BLASTX nr result

ID: Salvia21_contig00027546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027546
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putativ...   124   8e-27
ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...   123   1e-26
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
emb|CBI27769.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   3e-24

>ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 603

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/69 (88%), Positives = 63/69 (91%)
 Frame = -2

Query: 212 LGLHPALCDQLKERLGFEGPTLVQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIHMLQ 33
           LGLHP LCDQL+ER+GFE PT VQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIH LQ
Sbjct: 36  LGLHPTLCDQLRERMGFEAPTTVQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIHHLQ 95

Query: 32  SYDERIERA 6
           SY  RIERA
Sbjct: 96  SYSPRIERA 104


>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/70 (81%), Positives = 65/70 (92%)
 Frame = -2

Query: 212 LGLHPALCDQLKERLGFEGPTLVQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIHMLQ 33
           LGLH  LCDQL+ER+GFE PTL+QAQAIPVVLSGRH LVNAATGTGKT+AYLAPIIH LQ
Sbjct: 48  LGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQ 107

Query: 32  SYDERIERAD 3
           SYD+R++R+D
Sbjct: 108 SYDKRVQRSD 117


>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = -2

Query: 212 LGLHPALCDQLKERLGFEGPTLVQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIHMLQ 33
           LGLHP+LC+QL+ERLGFEGPTLVQAQAIPV+LSGRHVLVNAATGTGKTVAYLAPIIH L 
Sbjct: 26  LGLHPSLCNQLQERLGFEGPTLVQAQAIPVILSGRHVLVNAATGTGKTVAYLAPIIHHLH 85

Query: 32  SYDERIER 9
           SY  RI+R
Sbjct: 86  SYPSRIDR 93


>emb|CBI27769.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/69 (76%), Positives = 63/69 (91%)
 Frame = -2

Query: 212 LGLHPALCDQLKERLGFEGPTLVQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIHMLQ 33
           LGLHP LCDQL+ER+GFE PT+VQA+AIPV+L+GRHVLVNAATGTGKT+AYLAP+I+ L 
Sbjct: 35  LGLHPTLCDQLRERMGFEVPTIVQAEAIPVILAGRHVLVNAATGTGKTIAYLAPVINHLH 94

Query: 32  SYDERIERA 6
            YD RIER+
Sbjct: 95  KYDPRIERS 103


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
           vinifera]
          Length = 600

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/69 (76%), Positives = 63/69 (91%)
 Frame = -2

Query: 212 LGLHPALCDQLKERLGFEGPTLVQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIHMLQ 33
           LGLHP LCDQL+ER+GFE PT+VQA+AIPV+L+GRHVLVNAATGTGKT+AYLAP+I+ L 
Sbjct: 35  LGLHPTLCDQLRERMGFEVPTIVQAEAIPVILAGRHVLVNAATGTGKTIAYLAPVINHLH 94

Query: 32  SYDERIERA 6
            YD RIER+
Sbjct: 95  KYDPRIERS 103


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