BLASTX nr result

ID: Salvia21_contig00027510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00027510
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...    44   2e-09
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      40   2e-06
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]    42   2e-06
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      39   2e-06
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]    41   2e-06

>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1156

 Score = 44.3 bits (103), Expect(3) = 2e-09
 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
 Frame = +3

Query: 321  MYVDGILIARSNQEQISSLKRELQCIH-------SRLLINVL*INT*HKVRTRNLRIIHK 479
            +YVD +LIA  ++EQI++LK++L           ++ ++ +   +T   V   + R+ + 
Sbjct: 899  LYVDDMLIAAKSKEQITALKKQLSSEFDMKDLGVAKKILALQCASTDEDVEYMS-RVPYS 957

Query: 480  ---GSIMYIMVCRRLDLSHGISVVNR 548
               GS+MY MVC R DLSH +S+V+R
Sbjct: 958  SAVGSLMYAMVCSRPDLSHAMSLVSR 983



 Score = 33.9 bits (76), Expect(3) = 2e-09
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +1

Query: 547  DPGKHHWDAFLKWIFKFLKGASQYGIVFRR 636
            +PGK HW A ++WIF++LKG +   + F R
Sbjct: 987  NPGKEHWKA-VQWIFRYLKGIADACLKFGR 1015



 Score = 28.9 bits (63), Expect(3) = 2e-09
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 253 R*WYKRFDEEILQITYSKTKYDRCM 327
           R WYKRFD  +L   + ++++D C+
Sbjct: 861 RQWYKRFDSFMLSHGFKRSEFDSCV 885


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 39.7 bits (91), Expect(2) = 2e-06
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 480  GSIMYIMVCRRLDLSHGISVVNR 548
            GS+MY MVC RLDLSH +SVV+R
Sbjct: 1000 GSLMYAMVCSRLDLSHALSVVSR 1022



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +1

Query: 547  DPGKHHWDAFLKWIFKFLKGASQYGIVFRRMRD 645
            +PGK HW   ++WIFK+L+G S   + F R RD
Sbjct: 1026 NPGKEHWKV-VQWIFKYLRGTSSACLQFGRSRD 1057


>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
          Length = 367

 Score = 41.6 bits (96), Expect(2) = 2e-06
 Identities = 15/33 (45%), Positives = 26/33 (78%)
 Frame = +1

Query: 544 TDPGKHHWDAFLKWIFKFLKGASQYGIVFRRMR 642
           ++PG+ +WDA +KWIF++L+G + YGI F + +
Sbjct: 222 SNPGRMNWDA-IKWIFRYLRGTTDYGITFSKQQ 253



 Score = 35.8 bits (81), Expect(2) = 2e-06
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +3

Query: 480 GSIMYIMVCRRLDLSHGISVVNR 548
           G +MY MVC RLDL+H +SVV++
Sbjct: 197 GCLMYAMVCTRLDLAHAVSVVSK 219


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 38.9 bits (89), Expect(2) = 2e-06
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +1

Query: 547  DPGKHHWDAFLKWIFKFLKGASQYGIVFRRMRD 645
            +PGK HW A ++WIF++L+G S   + F R RD
Sbjct: 1119 NPGKEHWKA-VQWIFRYLRGTSSACLQFERSRD 1150



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +3

Query: 480  GSIMYIMVCRRLDLSHGISVVNR 548
            GS+MY MVC R DLSH +SVVNR
Sbjct: 1093 GSLMYAMVCCRPDLSHALSVVNR 1115


>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
          Length = 406

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 15/33 (45%), Positives = 26/33 (78%)
 Frame = +1

Query: 544 TDPGKHHWDAFLKWIFKFLKGASQYGIVFRRMR 642
           ++PG+ +WDA +KWIF++L+G + YGI F + +
Sbjct: 222 SNPGRMNWDA-VKWIFRYLRGTTDYGITFSKQQ 253



 Score = 35.8 bits (81), Expect(2) = 2e-06
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +3

Query: 480 GSIMYIMVCRRLDLSHGISVVNR 548
           G +MY MVC RLDL+H +SVV++
Sbjct: 197 GCLMYAMVCTRLDLAHAVSVVSK 219


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