BLASTX nr result

ID: Salvia21_contig00026821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026821
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   367   3e-99
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...   365   7e-99
gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' ...   365   7e-99
ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2...   365   1e-98
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ...   362   9e-98

>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  367 bits (941), Expect = 3e-99
 Identities = 177/240 (73%), Positives = 201/240 (83%)
 Frame = -1

Query: 957 VDFMFNXXXXXXXXXXXLTIYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKVDVVHVH 778
           VDFMFN           LT YS+  +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVH
Sbjct: 227 VDFMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVH 286

Query: 777 VNPIEPMPSCLHHRYVICGNREKYTTLLHLLQSDAPQSAIIFLGEQSEKSKKAGNAPPTT 598
           VN +EPMPSCLHHR+V+C  REK   LL LLQ D+P+SAIIF+ EQSEKSKKAGNAPP T
Sbjct: 287 VNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPIT 346

Query: 597 LLIEFLKSSYGGCLELVLLEEDINFNQRATSITDLKQSGGYLLVATDIAGRGVDLPETTH 418
           LL++FL SS GG   + LLEED+NFN+RA S+++L+  GGYLLVATDIA RGVDLPETTH
Sbjct: 347 LLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTH 406

Query: 417 IYNFDIPKDAINYLHRAGRTGRKPFSDSKCYVTSIISAEERFVLQRFENELHFQCEELFF 238
           IYNFDIPKDA+NYLHRAGRTGRKPFSD KC+VTSII+ EERFVLQRFENEL F CE+LFF
Sbjct: 407 IYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQLFF 466


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  365 bits (938), Expect = 7e-99
 Identities = 177/239 (74%), Positives = 200/239 (83%)
 Frame = -1

Query: 957 VDFMFNXXXXXXXXXXXLTIYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKVDVVHVH 778
           VDFMFN           LT YSS  +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVH
Sbjct: 227 VDFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVH 286

Query: 777 VNPIEPMPSCLHHRYVICGNREKYTTLLHLLQSDAPQSAIIFLGEQSEKSKKAGNAPPTT 598
           VN +EPMPSCLHHR+V+C  REK   LL LLQ D+P+SAIIF+ EQSEKSKKAGNAPP T
Sbjct: 287 VNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPIT 346

Query: 597 LLIEFLKSSYGGCLELVLLEEDINFNQRATSITDLKQSGGYLLVATDIAGRGVDLPETTH 418
           LL++FL SS GG   + LLEED+NFN+RA S+++L+  GGYLLVATDIA RGVDLPETTH
Sbjct: 347 LLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTH 406

Query: 417 IYNFDIPKDAINYLHRAGRTGRKPFSDSKCYVTSIISAEERFVLQRFENELHFQCEELF 241
           IYNFDIPKDA+NYLHRAGRTGRKPFSD KC+VTSII+ EERFVLQRFENEL F CE+LF
Sbjct: 407 IYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQLF 465


>gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana
           tabacum]
          Length = 425

 Score =  365 bits (938), Expect = 7e-99
 Identities = 177/239 (74%), Positives = 200/239 (83%)
 Frame = -1

Query: 957 VDFMFNXXXXXXXXXXXLTIYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKVDVVHVH 778
           VDFMFN           LT YSS  +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVH
Sbjct: 186 VDFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVH 245

Query: 777 VNPIEPMPSCLHHRYVICGNREKYTTLLHLLQSDAPQSAIIFLGEQSEKSKKAGNAPPTT 598
           VN +EPMPSCLHHR+V+C  REK   LL LLQ D+P+SAIIF+ EQSEKSKKAGNAPP T
Sbjct: 246 VNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPIT 305

Query: 597 LLIEFLKSSYGGCLELVLLEEDINFNQRATSITDLKQSGGYLLVATDIAGRGVDLPETTH 418
           LL++FL SS GG   + LLEED+NFN+RA S+++L+  GGYLLVATDIA RGVDLPETTH
Sbjct: 306 LLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTH 365

Query: 417 IYNFDIPKDAINYLHRAGRTGRKPFSDSKCYVTSIISAEERFVLQRFENELHFQCEELF 241
           IYNFDIPKDA+NYLHRAGRTGRKPFSD KC+VTSII+ EERFVLQRFENEL F CE+LF
Sbjct: 366 IYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQLF 424


>ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  365 bits (936), Expect = 1e-98
 Identities = 175/239 (73%), Positives = 201/239 (84%)
 Frame = -1

Query: 957 VDFMFNXXXXXXXXXXXLTIYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKVDVVHVH 778
           VDFMFN           LT YSS NSRQTVFASASIPQH RF+YDCIQQKWTK DVVHVH
Sbjct: 71  VDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVH 130

Query: 777 VNPIEPMPSCLHHRYVICGNREKYTTLLHLLQSDAPQSAIIFLGEQSEKSKKAGNAPPTT 598
           VNPIEPMP+CL HR+VIC  ++++ TLL LLQSDAP+S IIF+GEQSEKSKKAGN PPT 
Sbjct: 131 VNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPTI 190

Query: 597 LLIEFLKSSYGGCLELVLLEEDINFNQRATSITDLKQSGGYLLVATDIAGRGVDLPETTH 418
            L++FLK+SYG C E++LLEED+NFN RA S+++++Q GGYLLVATDIA RGVDLPE TH
Sbjct: 191 DLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVDLPEITH 250

Query: 417 IYNFDIPKDAINYLHRAGRTGRKPFSDSKCYVTSIISAEERFVLQRFENELHFQCEELF 241
           IYNF++P+ A++YLHRAGRTGRKPFSD KC VTSII  EERFVLQR+ENEL F CEELF
Sbjct: 251 IYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFNCEELF 309


>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 476

 Score =  362 bits (928), Expect = 9e-98
 Identities = 169/238 (71%), Positives = 201/238 (84%)
 Frame = -1

Query: 957 VDFMFNXXXXXXXXXXXLTIYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKVDVVHVH 778
           VDFMFN           LT YSS NSRQTVFASASIPQHRRF+YDCIQQKWTK D VHVH
Sbjct: 237 VDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKSDAVHVH 296

Query: 777 VNPIEPMPSCLHHRYVICGNREKYTTLLHLLQSDAPQSAIIFLGEQSEKSKKAGNAPPTT 598
           +NP++PMPSCL HR+VIC   +++  LL LLQ DAP+S I+F+GEQSEKSKKAG+APPTT
Sbjct: 297 INPVQPMPSCLQHRFVICSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAGHAPPTT 356

Query: 597 LLIEFLKSSYGGCLELVLLEEDINFNQRATSITDLKQSGGYLLVATDIAGRGVDLPETTH 418
           LL++FL++SY  C +++LLEED+NFN RA S++++KQ GGYLLVATDIA RGVDLPETTH
Sbjct: 357 LLVDFLETSYSDCSDILLLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGVDLPETTH 416

Query: 417 IYNFDIPKDAINYLHRAGRTGRKPFSDSKCYVTSIISAEERFVLQRFENELHFQCEEL 244
           IYNF++P+ A++YLHRAGRTGRKPFSD KCY T+II+ EERFVLQR+ENEL F CEEL
Sbjct: 417 IYNFELPRTAVDYLHRAGRTGRKPFSDEKCYATNIITPEERFVLQRYENELMFNCEEL 474


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