BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026783
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   402   e-110
ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containi...   397   e-108
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2...   393   e-107
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...   390   e-106
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   385   e-105

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  402 bits (1033), Expect = e-110
 Identities = 197/293 (67%), Positives = 235/293 (80%), Gaps = 5/293 (1%)
 Frame = -2

Query: 865  GYVLKLGLGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
            GY +KLG   DRYVQNALMD+YSR+GK+D+SE IF +ME +D VS+NTMITGYV+ G + 
Sbjct: 424  GYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYS 483

Query: 685  DALVLLHEMQTAEKKHGVNVDFDKNIEVS--FRPNSVTLMTILPGCAALAALTKGKEIHA 512
            +ALVLLHEMQ  E    V  D D + E    ++PN++TLMT+LPGCAALAA+ KGKEIHA
Sbjct: 484  NALVLLHEMQRMENTKDVKKD-DNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHA 542

Query: 511  YAFRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDG 332
            YA RN L SD+ VGSALVDMYAKCGCL ++R VF  MPN+NVITWN +IMA GMHG+G+ 
Sbjct: 543  YAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEE 602

Query: 331  ALTLFRKMVVD---GGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADH 161
            AL LF+ MV +   GGE KPNEVTFI VFAACSHSGL+ +G  LF  MK DHGVEP +DH
Sbjct: 603  ALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDH 662

Query: 160  YACVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIHQNVQLGEIS 2
            YACVVDLLGRAG+L+EAY+++N MP   DKVG WSSLLGACRIHQNV+LGE++
Sbjct: 663  YACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVA 715



 Score =  118 bits (296), Expect = 2e-24
 Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 17/295 (5%)
 Frame = -2

Query: 862  YVLKLG-LGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
            YVL+   L  + +V +AL+D+Y    +V+    +F ++  + I  +N MI+GY   G  E
Sbjct: 322  YVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDE 381

Query: 685  DALVLLHEMQTAEKKHGVNVDFDKNIEVS-FRPNSVTLMTILPGCAALAALTKGKEIHAY 509
             AL+L  EM                I+V+   PN+ T+ +++P C    A +  + IH Y
Sbjct: 382  KALILFIEM----------------IKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGY 425

Query: 508  AFRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGA 329
            A + G + D  V +AL+DMY++ G + ++ ++F+SM  R+ ++WN MI  Y + G    A
Sbjct: 426  AVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNA 485

Query: 328  LTLFRKMV---------------VDGGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMK 194
            L L  +M                  GG  KPN +T + V   C+    +  GK++     
Sbjct: 486  LVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI-HAYA 544

Query: 193  ADHGVEPNADHYACVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIH 29
              + +  +    + +VD+  + G L+ +  + N MP     V  W+ L+ AC +H
Sbjct: 545  IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP--NKNVITWNVLIMACGMH 597



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 4/243 (1%)
 Frame = -2

Query: 856 LKLGLGRDRY-VQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHEDA 680
           +K G G     V N L+++Y + G +     +F  +  +D VS+N+ I         E A
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQA 178

Query: 679 LVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAA---LTKGKEIHAY 509
           L     MQ             +N+E+S    S TL+++   C+ L     L  GK++H Y
Sbjct: 179 LEAFRAMQM------------ENMELS----SFTLVSVALACSNLGVMHGLRLGKQLHGY 222

Query: 508 AFRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGA 329
           + R G +      +AL+ MYAK G +  ++++FES  +R++++WN MI ++        A
Sbjct: 223 SLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEA 281

Query: 328 LTLFRKMVVDGGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYACV 149
           L  FR MV++G E+  + VT  +V  ACSH   +D GK++   +  ++ +  N+   + +
Sbjct: 282 LAFFRLMVLEGVEL--DGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSAL 339

Query: 148 VDL 140
           VD+
Sbjct: 340 VDM 342



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
 Frame = -2

Query: 595 RPNSVTLMTILPGCAALAALTKGKEIHAYAFRNGL-ESDVAVGSALVDMYAKCGCLIMAR 419
           RP++     +L   + L  L  G++IHA A + G   S V V + LV+MY KCG +    
Sbjct: 89  RPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVC 148

Query: 418 SVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKMVVDGGEVKPNEVTFIAVFAACSH 239
            VF+ + +R+ ++WN+ I A     + + AL  FR M ++  E+  +  T ++V  ACS+
Sbjct: 149 KVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMEL--SSFTLVSVALACSN 206

Query: 238 SGLVDD---GKQL 209
            G++     GKQL
Sbjct: 207 LGVMHGLRLGKQL 219


>ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  397 bits (1021), Expect = e-108
 Identities = 193/294 (65%), Positives = 237/294 (80%), Gaps = 6/294 (2%)
 Frame = -2

Query: 865  GYVLKLGLGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
            GY++K G G+D+YVQNALMD+YSR+G+V++S+ IF  M  +DIVS+NTMITG +VCG ++
Sbjct: 661  GYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYD 720

Query: 685  DALVLLHEMQTAEKKHGVN--VDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHA 512
            DAL LLHEMQ  + + G +  VD++ +  V F+PNSVTLMT+LPGCAALAAL KGKEIHA
Sbjct: 721  DALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHA 780

Query: 511  YAFRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDG 332
            YA +  L  DVAVGSALVDMYAKCGCL +A  VF+ MP RNVITWN +IMAYGMHG+G+ 
Sbjct: 781  YAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEE 840

Query: 331  ALTLFRKMVVDGGE----VKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNAD 164
            AL LFR M   GG     ++PNEVT+IA+FAACSHSG+VD+G  LF TMKA HGVEP  D
Sbjct: 841  ALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGD 900

Query: 163  HYACVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIHQNVQLGEIS 2
            HYAC+VDLLGR+GR+ EAY++IN MP  L+KV  WSSLLGACRIHQ+V+ GEI+
Sbjct: 901  HYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIA 954



 Score =  125 bits (313), Expect = 2e-26
 Identities = 84/266 (31%), Positives = 135/266 (50%), Gaps = 2/266 (0%)
 Frame = -2

Query: 829  YVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHEDALVLLHEMQTA 650
            Y  NAL+ +Y+R+G+V+ ++ +F   + KD+VS+NT+I+        E+AL+ ++ M   
Sbjct: 469  YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLM--- 525

Query: 649  EKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYAFRNG-LESDVAV 473
                         I    RP+ VTL ++LP C+ L  L  G+EIH YA RNG L  +  V
Sbjct: 526  -------------IVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFV 572

Query: 472  GSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKMVVDGG 293
            G+ALVDMY  C      R VF+ +  R V  WNA++  Y  +   D AL LF +M+ +  
Sbjct: 573  GTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISE-S 631

Query: 292  EVKPNEVTFIAVFAACSHSGLVDDGKQLF-QTMKADHGVEPNADHYACVVDLLGRAGRLD 116
            E  PN  TF +V  AC    +  D + +    +K   G +    +   ++D+  R GR++
Sbjct: 632  EFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVE 689

Query: 115  EAYDIINLMPVGLDKVGVWSSLLGAC 38
             +  I   M      +  W++++  C
Sbjct: 690  ISKTIFGRM--NKRDIVSWNTMITGC 713



 Score =  102 bits (254), Expect = 1e-19
 Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 22/300 (7%)
 Frame = -2

Query: 862  YVLKLG-LGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
            Y L+ G L  + +V  AL+D+Y    +      +F  +  + +  +N ++ GY    + +
Sbjct: 559  YALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDD 618

Query: 685  DALVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYA 506
             AL L  EM +               E  F PN+ T  ++LP C      +  + IH Y 
Sbjct: 619  QALRLFVEMIS---------------ESEFCPNATTFASVLPACVRCKVFSDKEGIHGYI 663

Query: 505  FRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGAL 326
             + G   D  V +AL+DMY++ G + +++++F  M  R++++WN MI    + G  D AL
Sbjct: 664  VKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDAL 723

Query: 325  TLFRKMVVDGGE----------------VKPNEVTFIAVFAACSHSGLVDDGKQLF---- 206
             L  +M    GE                 KPN VT + V   C+    +  GK++     
Sbjct: 724  NLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 783

Query: 205  -QTMKADHGVEPNADHYACVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIH 29
             Q +  D  V       + +VD+  + G L+ A  + + MP+    V  W+ L+ A  +H
Sbjct: 784  KQKLAMDVAVG------SALVDMYAKCGCLNLASRVFDQMPI--RNVITWNVLIMAYGMH 835



 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
 Frame = -2

Query: 592 PNSVTLMTILPGCAALAALTKGKEIHAYAFRNGLE--SDVAVGSALVDMYAKCGCLIMAR 419
           P++     +L   AA+  L  GK+IHA+ F+ G    S VAV ++LV+MY KCG L  AR
Sbjct: 328 PDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAAR 387

Query: 418 SVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKMVVDGGEVKPNEVTFIAVFAACSH 239
            VF+ +P+R+ ++WN+MI       E + +L LFR M+ +   V P   T ++V  ACSH
Sbjct: 388 QVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSE--NVDPTSFTLVSVAHACSH 445

Query: 238 -SGLVDDGKQLFQTMKADHGVEPNADHYACVVDLLGRAGRLDEAYDIINLMPVGLDKVGV 62
             G V  GKQ+      +  +    ++   +V +  R GR+++A  +  +   G D V  
Sbjct: 446 VRGGVRLGKQVHAYTLRNGDLRTYTNN--ALVTMYARLGRVNDAKALFGVFD-GKDLVS- 501

Query: 61  WSSLLGA 41
           W++++ +
Sbjct: 502 WNTVISS 508


>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
            predicted protein [Populus trichocarpa]
          Length = 814

 Score =  393 bits (1010), Expect = e-107
 Identities = 186/291 (63%), Positives = 234/291 (80%), Gaps = 3/291 (1%)
 Frame = -2

Query: 865  GYVLKLGLGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
            GYV+K GL  +RY+QNAL+D+YSR+G +  S+ IF +ME +DIVS+NT+IT YV+CG   
Sbjct: 343  GYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSS 402

Query: 685  DALVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYA 506
            DAL+LLHEMQ  E+K   + D++   +V F+PNS+TLMT+LPGCA+L+AL KGKEIHAYA
Sbjct: 403  DALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYA 462

Query: 505  FRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGAL 326
             RN L S V VGSALVDMYAKCGCL +AR VF+ MP RNVITWN +IMAYGMHG+G  +L
Sbjct: 463  IRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESL 522

Query: 325  TLFRKMVVD---GGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYA 155
             LF  MV +   GGEVKP EVTFIA+FA+CSHSG+VD+G  LF  MK +HG+EP  DHYA
Sbjct: 523  ELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYA 582

Query: 154  CVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIHQNVQLGEIS 2
            C+VDL+GRAG+++EAY ++N MP G DKVG WSSLLGACRI+ N+++GEI+
Sbjct: 583  CIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIA 633



 Score =  110 bits (276), Expect = 3e-22
 Identities = 71/281 (25%), Positives = 136/281 (48%), Gaps = 14/281 (4%)
 Frame = -2

Query: 829  YVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHEDALVLLHEMQTA 650
            +V +AL+D+Y   G+V+    +F ++  + I  +N MI GY    + E AL+L  EM+ A
Sbjct: 253  FVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAA 312

Query: 649  EKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYAFRNGLESDVAVG 470
               +                N+ T+ +I+P       +++ + IH Y  + GLE++  + 
Sbjct: 313  AGLYS---------------NATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQ 357

Query: 469  SALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKM------ 308
            +AL+DMY++ G +  ++ +F+SM +R++++WN +I +Y + G    AL L  +M      
Sbjct: 358  NALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEK 417

Query: 307  -VVDGG-------EVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYAC 152
               DG          KPN +T + V   C+    +  GK++       + +       + 
Sbjct: 418  STYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEI-HAYAIRNLLASQVTVGSA 476

Query: 151  VVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIH 29
            +VD+  + G L+ A  + + MP+    V  W+ ++ A  +H
Sbjct: 477  LVDMYAKCGCLNLARRVFDQMPI--RNVITWNVIIMAYGMH 515



 Score =  104 bits (259), Expect = 3e-20
 Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 6/278 (2%)
 Frame = -2

Query: 862 YVLKLGLGRDRYV--QNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYH 689
           +V K G G    V   N L+++Y + G +  +  +F  +  +D VS+N++I+        
Sbjct: 35  HVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIIS-------- 86

Query: 688 EDALVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALA---ALTKGKEI 518
             AL    E + A K       F   +   F P+S TL+++   C+ L     L  GK+I
Sbjct: 87  --ALCRFEEWEVAIKA------FRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQI 138

Query: 517 HAYAFRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEG 338
           H   FR G     +  +AL+ MYAK G L  A+S+     +R+++TWN+MI ++  +   
Sbjct: 139 HGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERF 197

Query: 337 DGALTLFRKMVVDGGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHY 158
             AL   R MV++G  VKP+ VTF +V  ACSH  L+  GK++         V  N+   
Sbjct: 198 MEALMFLRLMVLEG--VKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVG 255

Query: 157 ACVVDLLGRAGRLDEAYDIINLMPVGLD-KVGVWSSLL 47
           + +VD+    G+++    + + +   LD K+G+W++++
Sbjct: 256 SALVDMYCNCGQVESGRLVFDSV---LDRKIGLWNAMI 290



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
 Frame = -2

Query: 598 FRPNSVTLMTILPGCAALAALTKGKEIHAYAFRNGLES--DVAVGSALVDMYAKCGCLIM 425
           F P++     +L   A +  L  GK+IHA+ F+ G  S   V + + LV+MY KCG L  
Sbjct: 6   FSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGD 65

Query: 424 ARSVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKMVVDGGEVKPNEVTFIAVFAAC 245
           A  VF+ +  R+ ++WN++I A     E + A+  FR M+++G E  P+  T +++  AC
Sbjct: 66  AYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFE--PSSFTLVSMALAC 123

Query: 244 SHSGLVDD---GKQLFQTMKADHGVEPNADHYA-----CVVDLLGRAGRLDEAYDIINLM 89
           S+    D    GKQ+       HG      H+       ++ +  + GRLD+A  ++ L 
Sbjct: 124 SNLRKRDGLWLGKQI-------HGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLF 176

Query: 88  PVGLDKVGVWSSLLGA 41
               D V  W+S++ +
Sbjct: 177 E-DRDLV-TWNSMISS 190


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 874

 Score =  390 bits (1003), Expect = e-106
 Identities = 185/291 (63%), Positives = 237/291 (81%), Gaps = 5/291 (1%)
 Frame = -2

Query: 859  VLKLGLGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHEDA 680
            V+K G  +D+YVQNALMD+YSR+G+++++  IF +M  KDIVS+NTMITGYVVCG H+DA
Sbjct: 416  VVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDA 475

Query: 679  LVLLHEMQTAEKKHGVNV--DFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYA 506
            L LLH+MQ  + +H +N   D++ N     +PNSVTLMT+LPGCAALAAL KGKEIHAYA
Sbjct: 476  LNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYA 535

Query: 505  FRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGAL 326
             +  L  DVAVGSALVDMYAKCGCL ++R+VFE M  RNVITWN +IMAYGMHG+G+ AL
Sbjct: 536  VKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEAL 595

Query: 325  TLFRKMVVDGG---EVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYA 155
             LFR+MV +G    E++PNEVT+IA+FA+ SHSG+VD+G  LF TMKA HG+EP +DHYA
Sbjct: 596  KLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYA 655

Query: 154  CVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIHQNVQLGEIS 2
            C+VDLLGR+G+++EAY++I  MP  + KV  WSSLLGAC+IHQN+++GEI+
Sbjct: 656  CLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIA 706



 Score =  121 bits (303), Expect = 2e-25
 Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 1/259 (0%)
 Frame = -2

Query: 862 YVLKLGLGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHED 683
           +VL+ G  R  +  NAL+ +Y+++G+V  ++ +F   + KD+VS+NT+I+        E+
Sbjct: 212 FVLRNGDWRT-FTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEE 270

Query: 682 ALVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYAF 503
           AL+ LH M                ++   RPN VTL ++LP C+ L  L  GKEIHA+  
Sbjct: 271 ALLYLHVM----------------LQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVL 314

Query: 502 RNG-LESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGAL 326
            N  L  +  VG ALVDMY  C      R VF+ M  R +  WNAMI  Y  +     A+
Sbjct: 315 MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAI 374

Query: 325 TLFRKMVVDGGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYACVV 146
            LF +MV + G + PN VT  +V  AC       D K+   +     G E +      ++
Sbjct: 375 ELFVEMVFELG-LSPNSVTLSSVLPACVRCESFLD-KEGIHSCVVKWGFEKDKYVQNALM 432

Query: 145 DLLGRAGRLDEAYDIINLM 89
           D+  R GR++ A  I   M
Sbjct: 433 DMYSRMGRIEIARSIFGSM 451



 Score =  110 bits (274), Expect = 5e-22
 Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 21/288 (7%)
 Frame = -2

Query: 829  YVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHEDALVLLHEMQTA 650
            +V  AL+D+Y    + +    +F  M  + I  +N MI GYV   +  +A+ L  EM   
Sbjct: 324  FVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMV-- 381

Query: 649  EKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYAFRNGLESDVAVG 470
                          E+   PNSVTL ++LP C    +    + IH+   + G E D  V 
Sbjct: 382  -------------FELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQ 428

Query: 469  SALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKMVVDGGE 290
            +AL+DMY++ G + +ARS+F SM  +++++WN MI  Y + G  D AL L   M     E
Sbjct: 429  NALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAE 488

Query: 289  ----------------VKPNEVTFIAVFAACSHSGLVDDGKQLF-----QTMKADHGVEP 173
                            +KPN VT + V   C+    +  GK++      Q +  D  V  
Sbjct: 489  HRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVG- 547

Query: 172  NADHYACVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIH 29
                 + +VD+  + G L+ +  +   M V    V  W+ L+ A  +H
Sbjct: 548  -----SALVDMYAKCGCLNLSRTVFEQMSV--RNVITWNVLIMAYGMH 588



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
 Frame = -2

Query: 673 LLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYAFRNG 494
           L  + Q++   H     +   +     P++     +L   A +  L  GK++HA+ F+ G
Sbjct: 56  LRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG 115

Query: 493 LESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFR 314
                AV ++LV+MY KCG +  AR VF+ + NR+ ++WN+MI A     E + A+ LFR
Sbjct: 116 QALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFR 175

Query: 313 KMVVDGGEVKPNEVTFIAVFAACSH--SGLVDDGKQL--FQTMKADHGVEPNADHYACVV 146
            M+++   V P   T ++V  ACS+  +GL+  GKQ+  F     D     N      +V
Sbjct: 176 LMLLE--NVGPTSFTLVSVAHACSNLINGLL-LGKQVHAFVLRNGDWRTFTN----NALV 228

Query: 145 DLLGRAGRLDEAYDIINL 92
            +  + GR+ EA  + ++
Sbjct: 229 TMYAKLGRVYEAKTLFDV 246


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
            lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
            ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  385 bits (990), Expect = e-105
 Identities = 184/288 (63%), Positives = 233/288 (80%)
 Frame = -2

Query: 865  GYVLKLGLGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
            G+V+K GL RDR+VQNALMD+YSR+GK+D+++ IF  ME +D+V++NT+ITGYV    HE
Sbjct: 425  GFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHE 484

Query: 685  DALVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYA 506
            DAL++LH+MQ  E+K       ++   VS +PNS+TLMTILP CAAL+AL KGKEIHAYA
Sbjct: 485  DALLMLHKMQILERKAS-----ERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 539

Query: 505  FRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGAL 326
             +N L +DVAVGSALVDMYAKCGCL M+R VF+ +P RNVITWN ++MAYGMHG    A+
Sbjct: 540  IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAI 599

Query: 325  TLFRKMVVDGGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYACVV 146
             + R M+V G  VKPNEVTFI+VFAACSHSG+V++G ++F  MK D+GVEP++DHYACVV
Sbjct: 600  DMLRMMMVQG--VKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVV 657

Query: 145  DLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIHQNVQLGEIS 2
            DLLGRAGR+ EAY +INL+P   DK G WSSLLGACRIH N+++GEI+
Sbjct: 658  DLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIA 705



 Score =  116 bits (291), Expect = 6e-24
 Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 10/292 (3%)
 Frame = -2

Query: 862  YVLKLG-LGRDRYVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
            Y LK G L  + +V +AL+D+Y    +V     +F  M  + I  +N MITGY    Y E
Sbjct: 323  YALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDE 382

Query: 685  DALVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYA 506
            +AL+L  EM+ +                    NS T+  ++P C    A +K + IH + 
Sbjct: 383  EALLLFIEMEES---------------AGLLANSTTMAGVVPACVRSGAFSKKEAIHGFV 427

Query: 505  FRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGAL 326
             + GL+ D  V +AL+DMY++ G + +A+ +F  M +R+++TWN +I  Y      + AL
Sbjct: 428  VKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDAL 487

Query: 325  TLFRKMVV---------DGGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEP 173
             +  KM +             +KPN +T + +  +C+    +  GK++       + +  
Sbjct: 488  LMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNLAT 546

Query: 172  NADHYACVVDLLGRAGRLDEAYDIINLMPVGLDKVGVWSSLLGACRIHQNVQ 17
            +    + +VD+  + G L  +  + + +P+    V  W+ ++ A  +H N Q
Sbjct: 547  DVAVGSALVDMYAKCGCLQMSRKVFDQIPI--RNVITWNVIVMAYGMHGNSQ 596



 Score =  116 bits (290), Expect = 8e-24
 Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 1/248 (0%)
 Frame = -2

Query: 829 YVQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHEDALVLLHEMQTA 650
           ++ N L+ +Y ++GK+  S+ +  + E +D+V++NT+++         +AL  L EM   
Sbjct: 233 FIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREM--- 289

Query: 649 EKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYAFRNG-LESDVAV 473
                        +     P+  T+ ++LP C+ L  L  GKE+HAYA +NG L+ +  V
Sbjct: 290 -------------VLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 336

Query: 472 GSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKMVVDGG 293
           GSALVDMY  C  ++    VF+ M +R +  WNAMI  Y  +   + AL LF +M    G
Sbjct: 337 GSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAG 396

Query: 292 EVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYACVVDLLGRAGRLDE 113
            +  N  T   V  AC  SG     K+         G++ +      ++D+  R G++D 
Sbjct: 397 -LLANSTTMAGVVPACVRSGAFSK-KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDI 454

Query: 112 AYDIINLM 89
           A  I   M
Sbjct: 455 AKRIFGKM 462



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 71/277 (25%), Positives = 137/277 (49%), Gaps = 5/277 (1%)
 Frame = -2

Query: 862 YVLKLGLGRDRY-VQNALMDLYSRVGKVDVSEYIFHNMESKDIVSYNTMITGYVVCGYHE 686
           +V K G G D   V N L++LY + G       +F  +  ++ VS+N++I+   +C + +
Sbjct: 118 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS--LCSFEK 175

Query: 685 DALVLLHEMQTAEKKHGVNVDFDKNIEVSFRPNSVTLMTILPGCAAL---AALTKGKEIH 515
             + L                 D+++E    P+S TL+++   C+       L  GK++H
Sbjct: 176 WEMAL----------EAFRCMLDEDVE----PSSFTLVSVALACSNFPMPEGLLMGKQVH 221

Query: 514 AYAFRNGLESDVAVGSALVDMYAKCGCLIMARSVFESMPNRNVITWNAMIMAYGMHGEGD 335
           AY  R G E +  + + LV MY K G L  ++ +  S   R+++TWN ++ +   + +  
Sbjct: 222 AYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFL 280

Query: 334 GALTLFRKMVVDGGEVKPNEVTFIAVFAACSHSGLVDDGKQLFQTMKADHGVEPNADHYA 155
            AL   R+MV++G  V+P+  T  +V  ACSH  ++  GK+L      +  ++ N+   +
Sbjct: 281 EALEYLREMVLEG--VEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 338

Query: 154 CVVDLLGRAGRLDEAYDIINLMPVGLD-KVGVWSSLL 47
            +VD+     ++     + + M    D K+G+W++++
Sbjct: 339 ALVDMYCNCKQVLSGCRVFDGM---FDRKIGLWNAMI 372



 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 7/208 (3%)
 Frame = -2

Query: 610 IEVSFRPNSVTLMTILPGCAALAALTKGKEIHAYAFRNGLESD-VAVGSALVDMYAKCGC 434
           I +  +P++     +L   A L  +  GK+IHA+ ++ G   D V V + LV++Y KCG 
Sbjct: 85  IVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD 144

Query: 433 LIMARSVFESMPNRNVITWNAMIMAYGMHGEGDGALTLFRKMVVDGGEVKPNEVTFIAVF 254
                 VF+ +  RN ++WN++I +     + + AL  FR M+ +  +V+P+  T ++V 
Sbjct: 145 FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE--DVEPSSFTLVSVA 202

Query: 253 AACSHSGLVDD---GKQLFQTMKADHGV---EPNADHYACVVDLLGRAGRLDEAYDIINL 92
            ACS+  + +    GKQ+       +G+   E N+     +V + G+ G+L  +  ++  
Sbjct: 203 LACSNFPMPEGLLMGKQVHA-----YGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGS 257

Query: 91  MPVGLDKVGVWSSLLGACRIHQNVQLGE 8
              G D V  W+++L +  + QN Q  E
Sbjct: 258 FE-GRDLV-TWNTVLSS--LCQNEQFLE 281