BLASTX nr result

ID: Salvia21_contig00026696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026696
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    94   2e-17
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    90   2e-16
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   3e-16
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    84   4e-16
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    84   4e-16

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/86 (46%), Positives = 61/86 (70%)
 Frame = -1

Query: 383  FQNLKCSNKASLTKQLWSMIRNPNTLVARVFKALYFREGDVMQAQVRSSASYVWRTLLWS 204
            F++L   N+A L KQ W ++  P++LVAR+ KA YF   D M+A++ SS SY+WR+ LW 
Sbjct: 1142 FRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFLWG 1201

Query: 203  RDLVERGKYWKVGDGKNIRIFQDSWL 126
            R+L+ +G  W++GDGK +R+F D W+
Sbjct: 1202 RELLRKGVRWRIGDGKEVRVFIDPWV 1227


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/97 (40%), Positives = 63/97 (64%)
 Frame = -1

Query: 383 FQNLKCSNKASLTKQLWSMIRNPNTLVARVFKALYFREGDVMQAQVRSSASYVWRTLLWS 204
           F+ L   N A L KQ W  +RNP++LV R+F+A YFR    + A++ S+ SY+WR++L +
Sbjct: 323 FRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAA 382

Query: 203 RDLVERGKYWKVGDGKNIRIFQDSWLKSENLGRLITP 93
           + L++RG YW +  G  ++++ DSWL   +   +ITP
Sbjct: 383 QGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITP 419


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = -1

Query: 383  FQNLKCSNKASLTKQLWSMIRNPNTLVARVFKALYFREGDVMQAQVRSSASYVWRTLLWS 204
            F++L+  N A L +Q W ++R P++L+ARV KA Y+   D + A +  S SY WR++  S
Sbjct: 859  FRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRSIWSS 918

Query: 203  RDLVERGKYWKVGDGKNIRIFQDSWLKSENLGRLITPE 90
            + L++ G  W++G+G N+RI++D W+  E LGR IT E
Sbjct: 919  KALLKEGMVWRIGNGTNVRIWEDPWVLDE-LGRFITSE 955


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 83.6 bits (205), Expect(2) = 4e-16
 Identities = 33/97 (34%), Positives = 66/97 (68%)
 Frame = -1

Query: 383 FQNLKCSNKASLTKQLWSMIRNPNTLVARVFKALYFREGDVMQAQVRSSASYVWRTLLWS 204
           F++L C N+A L KQ+W  + +P++L ARV +  Y+ +G++++A+ +  +SY W+++L  
Sbjct: 673 FRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSSYAWQSILSG 732

Query: 203 RDLVERGKYWKVGDGKNIRIFQDSWLKSENLGRLITP 93
            +   +G  W++GDG  + I++DS + S + G+++TP
Sbjct: 733 SECF-KGYIWRIGDGSQVNIWEDSLIPSSSNGKVLTP 768



 Score = 25.8 bits (55), Expect(2) = 4e-16
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 63  VAELIN-AQGSWDKNIIDGLF 4
           V ELIN   G WD+++ID LF
Sbjct: 777 VEELINPVSGGWDEDLIDTLF 797


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 83.6 bits (205), Expect(2) = 4e-16
 Identities = 33/97 (34%), Positives = 66/97 (68%)
 Frame = -1

Query: 383 FQNLKCSNKASLTKQLWSMIRNPNTLVARVFKALYFREGDVMQAQVRSSASYVWRTLLWS 204
           F++L C N+A L KQ+W  + +P++L ARV +  Y+ +G++++A+ +  +SY W+++L  
Sbjct: 673 FRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSSYAWQSILSG 732

Query: 203 RDLVERGKYWKVGDGKNIRIFQDSWLKSENLGRLITP 93
            +   +G  W++GDG  + I++DS + S + G+++TP
Sbjct: 733 SECF-KGYIWRIGDGSQVNIWEDSLIPSSSNGKVLTP 768



 Score = 25.8 bits (55), Expect(2) = 4e-16
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 63  VAELIN-AQGSWDKNIIDGLF 4
           V ELIN   G WD+++ID LF
Sbjct: 777 VEELINPVSGGWDEDLIDTLF 797


Top