BLASTX nr result

ID: Salvia21_contig00026586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026586
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]    75   1e-11
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...    60   4e-07
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...    60   8e-07
gb|AAS01940.1| putative polyprotein [Oryza sativa Japonica Group]      59   1e-06
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    59   2e-06

>emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
          Length = 635

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 6/244 (2%)
 Frame = -1

Query: 750 TPLNKPQEEIFHLIKNQPFFRAPGSYRDGPP*EGPNNKLCEYHNVFGHYTKYCGHLKHQL 571
           TPL K  E++F +I++ P FR P   R  P  E   NK C+YH   GH T+ C  L + +
Sbjct: 316 TPLTKSYEKLFPIIRDLPGFRWPVPIRSNPS-ERDRNKRCDYHKDHGHTTETCRSLHYMV 374

Query: 570 ELLVRQGNLDQFIDRGNEGQRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 391
           E L++ G+L Q+I    +G+  +                                     
Sbjct: 375 EDLLKAGHLKQYIRTVPKGEGSSHGRGPC------------------------------- 403

Query: 390 XXXXXXXXXXRQAPHFPYRRKVHMICGE--NGMPTSNRAKKQVVRAVKSGYYPKRVMK-I 220
                       AP  P R  ++ I G   +   +S R +++++RA     +   +   +
Sbjct: 404 ------------APAAPVRVVINYIHGGPLDDEYSSKRKRQRLLRAATVREHVSSIQPGL 451

Query: 219 TSAAEEP---AITFGAEDLRTLMYPHDDALVIMADISDCIVHRIFVDSGSAVNILYLSCL 49
            S    P    I F A D   ++ PH DAL++   + D  V RI VD GS+ ++L ++ +
Sbjct: 452 ASGGIHPIDGTIVFPAVDPAQVLQPHRDALILTLGVGDFDVKRILVDPGSSADLLQVAVI 511

Query: 48  QNMG 37
           + MG
Sbjct: 512 KQMG 515


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -1

Query: 336 RRKVHMICGENGMPTSNRAKKQVVRAVKSGYYPKRVMKITSAAEEPAITFGAEDLRTLMY 157
           RR+V+MI G  G+     + + +   +KSG     +    +  E   +TF +EDL  +  
Sbjct: 287 RRRVNMIMG--GLTACRDSFRSIKEYIKSG--AATLWSSPATKEMTPLTFTSEDLFGVDL 342

Query: 156 PHDDALVIMADISDCIVHRIFVDSGSAVNILYLSCLQNMGI-EVHIEPMNAPL 1
           PH+D LVI   I +  V RI +D+GS+VN+++   LQ M + + HI+P   PL
Sbjct: 343 PHNDPLVIELHIGESEVTRILIDTGSSVNVVFKDVLQKMKVHDRHIKPSVRPL 395


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = -1

Query: 219 TSAAEEPAITFGAEDLRTLMYPHDDALVIMADISDCIVHRIFVDSGSAVNILYLSCLQNM 40
           T+  + P I+F  E+   L  PHDDALVI  D+ +C V R+ +D+GS+V++++L  L  M
Sbjct: 440 TNQIDCPEISFSEEETSDLDKPHDDALVISLDVGNCEVQRVLIDTGSSVDLIFLDTLVRM 499

Query: 39  GI 34
           GI
Sbjct: 500 GI 501


>gb|AAS01940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 680

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
 Frame = -1

Query: 237 KRVMKITSAAE------EPAITFGAEDLRTLMYPHDDALVIMADISDCIVHRIFVDSGSA 76
           + V  ITSA E         I+FG ED   +M+PH D LVI A+I+   V RI VD GS+
Sbjct: 4   RMVHSITSAGEGAPQYLNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSS 63

Query: 75  VNILYLSCLQNMGIEVH 25
            ++++     NMG+  H
Sbjct: 64  ADVIFAKAYANMGLPTH 80


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/55 (49%), Positives = 41/55 (74%)
 Frame = -1

Query: 198 AITFGAEDLRTLMYPHDDALVIMADISDCIVHRIFVDSGSAVNILYLSCLQNMGI 34
           +I+F  E+ R L  PHDDALVI  D+++  V RI +D+GS+V++++LS L+ MGI
Sbjct: 514 SISFNEEETRHLERPHDDALVITLDVANFEVSRILIDTGSSVDLIFLSTLEKMGI 568


Top