BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026566
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ...   269   2e-70
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in...   244   5e-63
gb|ADX99106.1| RNA polymerase beta II subunit [Xeroaloysia ovati...   241   6e-62
gb|ADX99108.1| RNA polymerase beta II subunit [Acantholippia sal...   240   8e-62
gb|ADX99128.1| RNA polymerase beta II subunit [Petrea volubilis]      239   1e-61

>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
            gi|401879732|gb|AFQ30919.1| RNA polymerase beta subunit-2
            (chloroplast) [Salvia miltiorrhiza]
          Length = 1395

 Score =  269 bits (687), Expect = 2e-70
 Identities = 132/132 (100%), Positives = 132/132 (100%)
 Frame = -3

Query: 397  RPCSNIIFNLNWYFLHPDYCQEKSTIMNLGQFICEKIYIAKNAPHLKLKSGQVILVQVDS 218
            RPCSNIIFNLNWYFLHPDYCQEKSTIMNLGQFICEKIYIAKNAPHLKLKSGQVILVQVDS
Sbjct: 1044 RPCSNIIFNLNWYFLHPDYCQEKSTIMNLGQFICEKIYIAKNAPHLKLKSGQVILVQVDS 1103

Query: 217  VVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSI 38
            VVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSI
Sbjct: 1104 VVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSI 1163

Query: 37   DSISMNLAKRVE 2
            DSISMNLAKRVE
Sbjct: 1164 DSISMNLAKRVE 1175


>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
            gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
            (chloroplast) [Sesamum indicum]
          Length = 1390

 Score =  244 bits (623), Expect = 5e-63
 Identities = 122/131 (93%), Positives = 125/131 (95%)
 Frame = -3

Query: 394  PCSNIIFNLNWYFLHPDYCQEKSTIMNLGQFICEKIYIAKNAPHLKLKSGQVILVQVDSV 215
            PCSNIIFNLNWYFLHP+YCQE ST+M+LGQFICE I IAKNAPHLK  SGQVILVQVDSV
Sbjct: 1044 PCSNIIFNLNWYFLHPNYCQETSTLMSLGQFICENICIAKNAPHLK--SGQVILVQVDSV 1101

Query: 214  VIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID 35
            VIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID
Sbjct: 1102 VIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID 1161

Query: 34   SISMNLAKRVE 2
            SISMNL KRVE
Sbjct: 1162 SISMNLEKRVE 1172


>gb|ADX99106.1| RNA polymerase beta II subunit [Xeroaloysia ovatifolia]
          Length = 680

 Score =  241 bits (614), Expect = 6e-62
 Identities = 120/131 (91%), Positives = 124/131 (94%)
 Frame = -3

Query: 394 PCSNIIFNLNWYFLHPDYCQEKSTIMNLGQFICEKIYIAKNAPHLKLKSGQVILVQVDSV 215
           PCSNIIFNLNWYF HP+YCQE STIM+LGQFICEKI IAKNAPHLK  SGQVILVQVDSV
Sbjct: 375 PCSNIIFNLNWYFRHPNYCQETSTIMSLGQFICEKICIAKNAPHLK--SGQVILVQVDSV 432

Query: 214 VIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID 35
           VIRSAKPYLATPGATVHGHYGEILY+GDTLITFIYEKSRSGDITQGLPKVEQV EVRSID
Sbjct: 433 VIRSAKPYLATPGATVHGHYGEILYQGDTLITFIYEKSRSGDITQGLPKVEQVFEVRSID 492

Query: 34  SISMNLAKRVE 2
           SISMNL KRV+
Sbjct: 493 SISMNLEKRVD 503


>gb|ADX99108.1| RNA polymerase beta II subunit [Acantholippia salsoloides]
          Length = 701

 Score =  240 bits (613), Expect = 8e-62
 Identities = 119/131 (90%), Positives = 124/131 (94%)
 Frame = -3

Query: 394 PCSNIIFNLNWYFLHPDYCQEKSTIMNLGQFICEKIYIAKNAPHLKLKSGQVILVQVDSV 215
           PCSNIIFNLNWYF HP+YCQE STIM+LGQFICEKI IAKNAPHLK  SGQVIL+QVDSV
Sbjct: 396 PCSNIIFNLNWYFRHPNYCQETSTIMSLGQFICEKICIAKNAPHLK--SGQVILIQVDSV 453

Query: 214 VIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID 35
           VIRSAKPYLATPGATVHGHYGEILY+GDTLITFIYEKSRSGDITQGLPKVEQV EVRSID
Sbjct: 454 VIRSAKPYLATPGATVHGHYGEILYQGDTLITFIYEKSRSGDITQGLPKVEQVFEVRSID 513

Query: 34  SISMNLAKRVE 2
           SISMNL KRV+
Sbjct: 514 SISMNLEKRVD 524


>gb|ADX99128.1| RNA polymerase beta II subunit [Petrea volubilis]
          Length = 682

 Score =  239 bits (611), Expect = 1e-61
 Identities = 120/131 (91%), Positives = 123/131 (93%)
 Frame = -3

Query: 394 PCSNIIFNLNWYFLHPDYCQEKSTIMNLGQFICEKIYIAKNAPHLKLKSGQVILVQVDSV 215
           PCSNIIFNLNWYFLHP YCQE STIM+LGQFICE I I+KN PHLK  SGQVILVQVDSV
Sbjct: 377 PCSNIIFNLNWYFLHPYYCQETSTIMSLGQFICENICISKNTPHLK--SGQVILVQVDSV 434

Query: 214 VIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID 35
           VIRSAKPYLATPGATVHGHYGEILY+GDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID
Sbjct: 435 VIRSAKPYLATPGATVHGHYGEILYQGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSID 494

Query: 34  SISMNLAKRVE 2
           SISMNL KRVE
Sbjct: 495 SISMNLEKRVE 505