BLASTX nr result

ID: Salvia21_contig00026012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00026012
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888144.1| F-box family protein [Arabidopsis lyrata sub...    64   1e-07

>ref|XP_002888144.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333985|gb|EFH64403.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 5/242 (2%)
 Frame = -1

Query: 1351 DGESEFPEEIIQHIQSLLSERDASRSTFLSKSWHRAWSTRPHLCFDQFAFRHSMDDFPRF 1172
            D  S+ P  ++  I S LS +++ R++ LS+ W   WS    L  D   F+  + D   F
Sbjct: 10   DWLSDLPCHLLCRILSKLSTKESVRTSILSRRWSNLWSLVSVLDLDFQDFK-GVHDMGEF 68

Query: 1171 TRNFMQRYEDLNPKMKSFKLWMIVHD--DSLATELILKAIKLGAIDLTVEFSVWDTSRCF 998
              +FM+ +E+L  K+K F L+  VH+    +    + K +KLG  DLT++  V       
Sbjct: 69   IDSFMESHEELGLKLKRFNLFYAVHEHFHKVFVRRLNKVVKLGVCDLTIQNMVDVDEALV 128

Query: 997  VIPDEVLESQTLARLSVSRAMVDFXXXXXXXXXXXXXXXNVTVNSD---LIRDLISRCPX 827
             +P  +    TL  L V   + D                   V  D   ++  LIS CP 
Sbjct: 129  RMPLSLYSCATLVNLIVYCVVFDHPGSKSVSLPSVKKMYFEGVKFDGHSVLETLISSCP- 187

Query: 826  XXXXXXXXXXXSHPFCVDKMFKLHKLKSLRLEGLDTRDTLSKSSNFNLWHQFPCLKELAI 647
                        HP   +   ++ +++S  LE         +  N N+    P LK ++I
Sbjct: 188  ---VLEELTVIPHP---EDYLEVIRVRSQSLESFRLESKRFECDNPNVEIDAPSLKFMSI 241

Query: 646  VD 641
             D
Sbjct: 242  FD 243


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