BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00025253
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15896.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|2...   357   2e-96
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...   354   2e-95
ref|NP_187518.1| pentatricopeptide repeat-containing protein [Ar...   339   4e-91

>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  370 bits (950), Expect = e-100
 Identities = 173/297 (58%), Positives = 225/297 (75%)
 Frame = +1

Query: 1   LTPKRLLHLLKSEKXXXXXXXXXXXXXXHPNYAHTPAVFHHILRRLSASKDPKLLPNITR 180
           L+PKR++ LLKSEK               P Y+HTP VFHHIL+RL    DPKL+ +++R
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLF---DPKLVAHVSR 64

Query: 181 IVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAF 360
           IV+LIR QKC C ED AL V+K Y++N M ++A+++F++M E+FGC+PG+RSYNSL+NA 
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 361 VASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDV 540
           + SN+  +AE F   F  M +SPNL+T+NIL+KI+CRK++FDKA+EL+N MWE+   PDV
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184

Query: 541 YSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWER 720
           +SYGTLIN LAK+G + +ALK+FDEM ERG+ PDV CYNILIDGF KKGD      IWER
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 244

Query: 721 LTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
           L K   VYP++ +YNV+I+GLCKCG+F E  E+W RM+KNER  DLYTYS LIHG+C
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301



 Score =  134 bits (336), Expect = 4e-29
 Identities = 69/214 (32%), Positives = 129/214 (60%), Gaps = 1/214 (0%)
 Frame = +1

Query: 253 SRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQ-LSKAELFLRNFRVMSVSP 429
           ++N  +  A+++F++M E  G  P V  YN L++ F      L+ +E++ R  +  SV P
Sbjct: 195 AKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253

Query: 430 NLETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVF 609
           N+ ++N+++   C+  +FD++ E+ + M + +   D+Y+Y TLI+GL  SG++  A +V+
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 610 DEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCK 789
            EM E G+ PDV+ YN +++G+L+ G  +    +W+ + K+     +VV+YN+LI GL +
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG--CRTVVSYNILIRGLFE 371

Query: 790 CGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
             +  E + +WE + + +   D  TY  L+HG+C
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 56/192 (29%), Positives = 99/192 (51%)
 Frame = +1

Query: 163  LPNITRIVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYN 342
            L  +  ++D +    C  N     AV+  + R   LE A+  F  M    GC P V +YN
Sbjct: 445  LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYN 503

Query: 343  SLMNAFVASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWER 522
            +L+N    + + S+A   ++        PN+ T+++L+   C+ ++ D A  L     E+
Sbjct: 504  TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563

Query: 523  DLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAY 702
               PDV  +  +I+GL  SG V +AL+++ EM +R   P+++ +N L++GF K  D++  
Sbjct: 564  GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623

Query: 703  KGIWERLTKDSW 738
              IW+ + + SW
Sbjct: 624  SKIWDHILQ-SW 634



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 54/202 (26%), Positives = 100/202 (49%)
 Frame = +1

Query: 256  RNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNL 435
            R   L+    V ++M +  GC+P     N+++N FV +++L  A  F  N       P +
Sbjct: 441  REGRLDEVAGVLDQMTK-HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 436  ETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDE 615
             T+N L+    +   F +A  L+  M  +   P++ +Y  L+NGL +   +  AL ++ +
Sbjct: 500  VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559

Query: 616  MLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCG 795
             LE+G KPDV  +NI+I G    G  +    ++  + +   V P++VT+N L+ G  K  
Sbjct: 560  ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV-PNLVTHNTLMEGFYKVR 618

Query: 796  RFREGVELWERMRKNERKMDLY 861
             F    ++W+ + ++    + Y
Sbjct: 619  DFERASKIWDHILQSWSSSNCY 640



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 36/244 (14%)
 Frame = +1

Query: 268  LERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSP--NLET 441
            L+ A  V+++M E  G  P V  YN+++N ++ + ++ +    L  ++VM       + +
Sbjct: 306  LDGATRVYKEMAEN-GVSPDVVVYNTMLNGYLRAGRIEEC---LELWKVMEKEGCRTVVS 361

Query: 442  FNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEML 621
            +NIL++      + D+A  +  ++ E+D   D  +YG L++GL K+G +++AL + +E  
Sbjct: 362  YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 622  ERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTK------------------------ 729
                  D   Y+ +I+G  ++G  D   G+ +++TK                        
Sbjct: 422  NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE 481

Query: 730  ----------DSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALI 879
                          +P+VVTYN LI+GL K  RF E   L + M     K ++ TYS L+
Sbjct: 482  DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541

Query: 880  HGMC 891
            +G+C
Sbjct: 542  NGLC 545



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 57/235 (24%), Positives = 113/235 (48%)
 Frame = +1

Query: 181  IVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAF 360
            I +L+  + C  +  T   ++    +N  L +A+ + E+ +   G +    +Y+S++N  
Sbjct: 381  IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG-DLDTFAYSSMINGL 439

Query: 361  VASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDV 540
                +L +    L         PN    N ++    R  + + A      M  +   P V
Sbjct: 440  CREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 541  YSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWER 720
             +Y TLINGL+K+    EA  +  EML +G KP+++ Y++L++G  +    D    +W +
Sbjct: 500  VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559

Query: 721  LTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHG 885
              +  +  P V  +N++I GLC  G+  + ++L+  M++ +   +L T++ L+ G
Sbjct: 560  ALEKGF-KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
 Frame = +1

Query: 259 NQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNLE 438
           N  ++ A+ ++E + E   C   + +Y  L++    +  L+KA   L          +  
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSM-TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF 430

Query: 439 TFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEM 618
            ++ ++   CR+   D+   +++ M +    P+ +    +ING  ++  + +AL+ F  M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 619 LERGLKPDVMCYNILIDGFLKKGDY-DAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCG 795
           + +G  P V+ YN LI+G  K   + +AY  + E L K  W  P+++TY++L++GLC+  
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK-GWK-PNMITYSLLMNGLCQGK 548

Query: 796 RFREGVELWERMRKNERKMDLYTYSALIHGMC 891
           +    + LW +  +   K D+  ++ +IHG+C
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580


>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  370 bits (950), Expect = e-100
 Identities = 173/297 (58%), Positives = 225/297 (75%)
 Frame = +1

Query: 1   LTPKRLLHLLKSEKXXXXXXXXXXXXXXHPNYAHTPAVFHHILRRLSASKDPKLLPNITR 180
           L+PKR++ LLKSEK               P Y+HTP VFHHIL+RL    DPKL+ +++R
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLF---DPKLVAHVSR 64

Query: 181 IVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAF 360
           IV+LIR QKC C ED AL V+K Y++N M ++A+++F++M E+FGC+PG+RSYNSL+NA 
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 361 VASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDV 540
           + SN+  +AE F   F  M +SPNL+T+NIL+KI+CRK++FDKA+EL+N MWE+   PDV
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184

Query: 541 YSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWER 720
           +SYGTLIN LAK+G + +ALK+FDEM ERG+ PDV CYNILIDGF KKGD      IWER
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 244

Query: 721 LTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
           L K   VYP++ +YNV+I+GLCKCG+F E  E+W RM+KNER  DLYTYS LIHG+C
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301



 Score =  134 bits (336), Expect = 4e-29
 Identities = 69/214 (32%), Positives = 129/214 (60%), Gaps = 1/214 (0%)
 Frame = +1

Query: 253 SRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQ-LSKAELFLRNFRVMSVSP 429
           ++N  +  A+++F++M E  G  P V  YN L++ F      L+ +E++ R  +  SV P
Sbjct: 195 AKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253

Query: 430 NLETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVF 609
           N+ ++N+++   C+  +FD++ E+ + M + +   D+Y+Y TLI+GL  SG++  A +V+
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 610 DEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCK 789
            EM E G+ PDV+ YN +++G+L+ G  +    +W+ + K+     +VV+YN+LI GL +
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG--CRTVVSYNILIRGLFE 371

Query: 790 CGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
             +  E + +WE + + +   D  TY  L+HG+C
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405



 Score =  115 bits (289), Expect = 1e-23
 Identities = 63/217 (29%), Positives = 112/217 (51%)
 Frame = +1

Query: 163  LPNITRIVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYN 342
            L  +  ++D +    C  N     AV+  + R   LE A+  F  M    GC P V +YN
Sbjct: 445  LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYN 503

Query: 343  SLMNAFVASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWER 522
            +L+N    + + S+A   ++        PN+ T+++L+   C+ ++ D A  L     E+
Sbjct: 504  TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563

Query: 523  DLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAY 702
               PDV  +  +I+GL  SG V +AL+++ EM +R   P+++ +N L++GF K  D++  
Sbjct: 564  GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623

Query: 703  KGIWERLTKDSWVYPSVVTYNVLISGLCKCGRFREGV 813
              IW+ + +     P +++YN+ + GLC C R  + V
Sbjct: 624  SKIWDHILQYG-PQPDIISYNITLKGLCSCHRISDAV 659



 Score =  102 bits (255), Expect = 9e-20
 Identities = 57/212 (26%), Positives = 107/212 (50%)
 Frame = +1

Query: 256  RNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNL 435
            R   L+    V ++M +  GC+P     N+++N FV +++L  A  F  N       P +
Sbjct: 441  REGRLDEVAGVLDQMTK-HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 436  ETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDE 615
             T+N L+    +   F +A  L+  M  +   P++ +Y  L+NGL +   +  AL ++ +
Sbjct: 500  VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559

Query: 616  MLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCG 795
             LE+G KPDV  +NI+I G    G  +    ++  + +   V P++VT+N L+ G  K  
Sbjct: 560  ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV-PNLVTHNTLMEGFYKVR 618

Query: 796  RFREGVELWERMRKNERKMDLYTYSALIHGMC 891
             F    ++W+ + +   + D+ +Y+  + G+C
Sbjct: 619  DFERASKIWDHILQYGPQPDIISYNITLKGLC 650



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 36/244 (14%)
 Frame = +1

Query: 268  LERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSP--NLET 441
            L+ A  V+++M E  G  P V  YN+++N ++ + ++ +    L  ++VM       + +
Sbjct: 306  LDGATRVYKEMAEN-GVSPDVVVYNTMLNGYLRAGRIEEC---LELWKVMEKEGCRTVVS 361

Query: 442  FNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEML 621
            +NIL++      + D+A  +  ++ E+D   D  +YG L++GL K+G +++AL + +E  
Sbjct: 362  YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 622  ERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTK------------------------ 729
                  D   Y+ +I+G  ++G  D   G+ +++TK                        
Sbjct: 422  NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE 481

Query: 730  ----------DSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALI 879
                          +P+VVTYN LI+GL K  RF E   L + M     K ++ TYS L+
Sbjct: 482  DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541

Query: 880  HGMC 891
            +G+C
Sbjct: 542  NGLC 545



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 57/235 (24%), Positives = 113/235 (48%)
 Frame = +1

Query: 181  IVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAF 360
            I +L+  + C  +  T   ++    +N  L +A+ + E+ +   G +    +Y+S++N  
Sbjct: 381  IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG-DLDTFAYSSMINGL 439

Query: 361  VASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDV 540
                +L +    L         PN    N ++    R  + + A      M  +   P V
Sbjct: 440  CREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 499

Query: 541  YSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWER 720
             +Y TLINGL+K+    EA  +  EML +G KP+++ Y++L++G  +    D    +W +
Sbjct: 500  VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559

Query: 721  LTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHG 885
              +  +  P V  +N++I GLC  G+  + ++L+  M++ +   +L T++ L+ G
Sbjct: 560  ALEKGF-KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
 Frame = +1

Query: 259 NQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNLE 438
           N  ++ A+ ++E + E   C   + +Y  L++    +  L+KA   L          +  
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSM-TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF 430

Query: 439 TFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEM 618
            ++ ++   CR+   D+   +++ M +    P+ +    +ING  ++  + +AL+ F  M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 619 LERGLKPDVMCYNILIDGFLKKGDY-DAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCG 795
           + +G  P V+ YN LI+G  K   + +AY  + E L K  W  P+++TY++L++GLC+  
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK-GWK-PNMITYSLLMNGLCQGK 548

Query: 796 RFREGVELWERMRKNERKMDLYTYSALIHGMC 891
           +    + LW +  +   K D+  ++ +IHG+C
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 30/125 (24%), Positives = 64/125 (51%)
 Frame = +1

Query: 313 GCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKA 492
           G +P V+ +N +++   +S ++  A       +     PNL T N L++   + R+F++A
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623

Query: 493 RELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDG 672
            ++ + + +    PD+ SY   + GL     + +A+   ++ ++RG+ P  + +NIL+  
Sbjct: 624 SKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRA 683

Query: 673 FLKKG 687
            L  G
Sbjct: 684 VLDNG 688


>ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|222867590|gb|EEF04721.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  357 bits (916), Expect = 2e-96
 Identities = 170/297 (57%), Positives = 225/297 (75%)
 Frame = +1

Query: 1   LTPKRLLHLLKSEKXXXXXXXXXXXXXXHPNYAHTPAVFHHILRRLSASKDPKLLPNITR 180
           L+ ++L  LLK+EK               P Y H+P +F  ILRRLS   DPKL+ ++TR
Sbjct: 8   LSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLS---DPKLVVHVTR 64

Query: 181 IVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAF 360
           IV+LI+ QKC C ED  L VLK Y++++M   A++ F+KM+E+FGC+PG+RSYN+L+NAF
Sbjct: 65  IVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAF 124

Query: 361 VASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDV 540
           + +N L KAE FL  F  + + PNL+T+NIL+KI+ +KR+F +A+ L++ MW +DL PDV
Sbjct: 125 IEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDV 184

Query: 541 YSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWER 720
           YSYGT+ING+ KSGD+  AL+VFDEM ERGL PDVMCYNI+IDGF K+GDY   K IWER
Sbjct: 185 YSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWER 244

Query: 721 LTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
           L K S VYP+VVTYNV+I+GLCK GRF E +E+WERM+KNE +MDL+TYS+LI G+C
Sbjct: 245 LVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLC 301



 Score =  118 bits (296), Expect = 2e-24
 Identities = 67/209 (32%), Positives = 118/209 (56%), Gaps = 1/209 (0%)
 Frame = +1

Query: 268 LERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVA-SNQLSKAELFLRNFRVMSVSPNLETF 444
           L  A+EVF++M E  G  P V  YN +++ F    + +   E++ R  +   V PN+ T+
Sbjct: 200 LVSALEVFDEMFER-GLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTY 258

Query: 445 NILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLE 624
           N+++   C+   FD++ E+   M + +   D+++Y +LI GL   G+V  A++V+ EM++
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318

Query: 625 RGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCGRFR 804
           R +  DV+ YN L++GF + G       +W  + K++    +VV+YN+ I GL +  +  
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN--CHNVVSYNIFIRGLFENRKVE 376

Query: 805 EGVELWERMRKNERKMDLYTYSALIHGMC 891
           E + +WE +R+     D  TY  LIHG+C
Sbjct: 377 EAISVWELLRRRGSGADSTTYGVLIHGLC 405



 Score =  114 bits (284), Expect = 4e-23
 Identities = 60/211 (28%), Positives = 111/211 (52%)
 Frame = +1

Query: 208  CPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKA 387
            C  +      ++  + R   LE A+  F +M E  GC P V SYN+L+N    + + S A
Sbjct: 460  CELSPHVCNPLINGFVRASKLEEAICFFREM-ETKGCSPTVVSYNTLINGLCKAERFSDA 518

Query: 388  ELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLING 567
              F++        P++ T+++L+   C+ ++ D A  L   +  + L PDV  +  L++G
Sbjct: 519  YSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHG 578

Query: 568  LAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYP 747
            L  +G + +AL ++  M +    P+++ +N L+DG  K  + +    IW  + K+ +  P
Sbjct: 579  LCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGF-QP 637

Query: 748  SVVTYNVLISGLCKCGRFREGVELWERMRKN 840
             +++YN+ + GLC CGR  +G+ L++   KN
Sbjct: 638  DIISYNITLKGLCSCGRISDGIALFDDALKN 668



 Score =  113 bits (282), Expect = 7e-23
 Identities = 62/213 (29%), Positives = 111/213 (52%)
 Frame = +1

Query: 253  SRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPN 432
            S+   ++ A+ +  +M + +GCE      N L+N FV +++L +A  F R       SP 
Sbjct: 440  SKQGRVDEALGIVHQMDK-YGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPT 498

Query: 433  LETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFD 612
            + ++N L+   C+   F  A   +  M E+D  PD+ +Y  L++GL +   +  AL ++ 
Sbjct: 499  VVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWR 558

Query: 613  EMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKC 792
            ++L +GL+PDV  +NIL+ G    G  +    ++  + K S   P++VT+N L+ GL K 
Sbjct: 559  QVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM-KQSNCLPNLVTHNTLMDGLYKA 617

Query: 793  GRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
                    +W  M KN  + D+ +Y+  + G+C
Sbjct: 618  RECEMASVIWACMFKNGFQPDIISYNITLKGLC 650



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 35/243 (14%)
 Frame = +1

Query: 268  LERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKA-ELFLRNFRVMSVSPNLETF 444
            ++ A+EV+++M +       V +YN+L+N F  + ++ ++ EL++   +      N+ ++
Sbjct: 306  VDGAVEVYKEMVKR-SVVVDVVTYNALLNGFCRAGKIKESFELWVMMGK--ENCHNVVSY 362

Query: 445  NILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLE 624
            NI ++     R+ ++A  +  ++  R    D  +YG LI+GL K+G +++ALK+  E  +
Sbjct: 363  NIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKD 422

Query: 625  RGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTK------------------------- 729
             G K D   Y+ ++DG  K+G  D   GI  ++ K                         
Sbjct: 423  GGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEE 482

Query: 730  ---------DSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIH 882
                          P+VV+YN LI+GLCK  RF +     + M + + K D+ TYS L+ 
Sbjct: 483  AICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMD 542

Query: 883  GMC 891
            G+C
Sbjct: 543  GLC 545



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 39/131 (29%), Positives = 66/131 (50%)
 Frame = +1

Query: 307 VFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFD 486
           V G EP V  +N LM+   ++ ++  A L   N +  +  PNL T N L+    + RE +
Sbjct: 562 VKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECE 621

Query: 487 KARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILI 666
            A  +   M++    PD+ SY   + GL   G + + + +FD+ L+ G+ P  + + IL+
Sbjct: 622 MASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILV 681

Query: 667 DGFLKKGDYDA 699
              LK G  D+
Sbjct: 682 RAVLKLGPLDS 692


>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score =  354 bits (908), Expect = 2e-95
 Identities = 168/297 (56%), Positives = 225/297 (75%)
 Frame = +1

Query: 1   LTPKRLLHLLKSEKXXXXXXXXXXXXXXHPNYAHTPAVFHHILRRLSASKDPKLLPNITR 180
           L+ K LL LLK+EK                N +H+  VFHHILRRL+A  D +L+ +++R
Sbjct: 11  LSSKLLLKLLKAEKNPLSALSLFESASR--NKSHSAHVFHHILRRLAA--DSRLVSHVSR 66

Query: 181 IVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAF 360
           IVD+++ QKCPC ED AL V+K Y++N+M  +A++ F+ M+++FGC+PGVRSYN+L+NAF
Sbjct: 67  IVDIVKAQKCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAF 126

Query: 361 VASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDV 540
           V  N+  +AE F R F  M VSPNL+T+NIL+KI+C+K++ +KA  L++ MW ++L PDV
Sbjct: 127 VELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDV 186

Query: 541 YSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWER 720
           +SYGTLING+ K GD+  ALKVFDEM  RG+  DV CYN+LIDGF K GDYD  K IWER
Sbjct: 187 FSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWER 246

Query: 721 LTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
           L KD  VYP+VVTYN++I+GLCKCGRF E +E+WERM KNER+ D++TYS+LIHG+C
Sbjct: 247 LVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLC 303



 Score =  119 bits (298), Expect = 9e-25
 Identities = 65/206 (31%), Positives = 119/206 (57%), Gaps = 1/206 (0%)
 Frame = +1

Query: 277 AMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKA-ELFLRNFRVMSVSPNLETFNIL 453
           A++VF++M  V G    V  YN L++ F       K  E++ R  +  SV PN+ T+NI+
Sbjct: 205 ALKVFDEMS-VRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIM 263

Query: 454 LKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLERGL 633
           +   C+   FD++ E+   M + +   D+++Y +LI+GL ++G++  A++V+ E++E  L
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323

Query: 634 KPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCGRFREGV 813
             D + +N +++GF + G       +W  + K++    +VV+YN+LI GL + G+  E +
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN--CQTVVSYNILIKGLFENGKVEEAI 381

Query: 814 ELWERMRKNERKMDLYTYSALIHGMC 891
            +WE + K   + +  TY  LIHG+C
Sbjct: 382 SIWELLCKKGCRPESTTYGVLIHGLC 407



 Score =  105 bits (261), Expect = 2e-20
 Identities = 58/209 (27%), Positives = 110/209 (52%), Gaps = 1/209 (0%)
 Frame = +1

Query: 268  LERAMEVFEKM-KEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNLETF 444
            ++ A+ +  +M K  +  +P V   N L+N FV +++L  A  F R       SP + ++
Sbjct: 447  MDEAISIVNQMDKRGYKLDPHV--CNPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504

Query: 445  NILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLE 624
            N L+K  C+   F +A   +  M E++  PD+ +   L++GL +   +  AL ++ + L+
Sbjct: 505  NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564

Query: 625  RGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCGRFR 804
            +G KPD+  YNIL+ G       +    ++  + + + V P++VT N L+ GL K   + 
Sbjct: 565  KGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCV-PNLVTRNTLMEGLYKVRDYE 623

Query: 805  EGVELWERMRKNERKMDLYTYSALIHGMC 891
            +  E+W+ + K+    D+ +Y+  I G+C
Sbjct: 624  KASEIWDCILKDGLHPDIISYNITIKGLC 652



 Score =  104 bits (260), Expect = 2e-20
 Identities = 53/189 (28%), Positives = 100/189 (52%)
 Frame = +1

Query: 250  YSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSP 429
            + R   LE A+  F +M E  GC P + SYN+L+     + + S+A  F++        P
Sbjct: 476  FVRASKLEDAINFFREM-ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKP 534

Query: 430  NLETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVF 609
            ++ T ++L+   C++++ + A  L     ++   PD+  Y  L++GL     + +AL+++
Sbjct: 535  DMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLY 594

Query: 610  DEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCK 789
              M      P+++  N L++G  K  DY+    IW+ + KD  ++P +++YN+ I GLC 
Sbjct: 595  SHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDG-LHPDIISYNITIKGLCS 653

Query: 790  CGRFREGVE 816
            C R  + +E
Sbjct: 654  CSRISDAIE 662



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
 Frame = +1

Query: 238  VLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVM 417
            ++K    N  +E A+ ++E + +  GC P   +Y  L++    + +L+KA   L+ F+  
Sbjct: 367  LIKGLFENGKVEEAISIWELLCKK-GCRPESTTYGVLIHGLCKNGRLNKA---LKIFKEA 422

Query: 418  SVSP---NLETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDV 588
               P   +   ++ ++   C++   D+A  ++N M +R    D +    LING  ++  +
Sbjct: 423  EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKL 482

Query: 589  HEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDY-DAYKGIWERLTKDSWVYPSVVTYN 765
             +A+  F EM  +G  P ++ YN LI G  K   + +AY  + E L K+ W  P ++T +
Sbjct: 483  EDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE-W-KPDMITCS 540

Query: 766  VLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
            +L+ GLC+  +    + LW++      K D+  Y+ L+HG+C
Sbjct: 541  LLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLC 582



 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 60/308 (19%)
 Frame = +1

Query: 148  KDPKLLPNITRIVDLIR-LQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFG-CE 321
            KD  + PN+     +I  L KC   +++    L+I+ R    ER  ++F     + G CE
Sbjct: 249  KDCSVYPNVVTYNIMINGLCKCGRFDES----LEIWERMTKNEREKDMFTYSSLIHGLCE 304

Query: 322  PG-----VRSY---------------NSLMNAFVASNQLSKA-ELFLRNFRVMSVSPNLE 438
             G     VR Y               N+++N F  + ++ ++ EL++    VM    N +
Sbjct: 305  AGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWM----VMG-KENCQ 359

Query: 439  T---FNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVF 609
            T   +NIL+K      + ++A  +  ++ ++   P+  +YG LI+GL K+G +++ALK+F
Sbjct: 360  TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIF 419

Query: 610  DEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSW----------------- 738
             E  +   K D   Y+ ++DG  K+G  D    I  ++ K  +                 
Sbjct: 420  KEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRA 479

Query: 739  -----------------VYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTY 867
                               P++V+YN LI GLCK  RF E     + M + E K D+ T 
Sbjct: 480  SKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITC 539

Query: 868  SALIHGMC 891
            S L+ G+C
Sbjct: 540  SLLMDGLC 547



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 36/137 (26%), Positives = 74/137 (54%)
 Frame = +1

Query: 256 RNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNL 435
           + + +E A+ ++++  +  G +P +  YN LM+   +  +L  A     + +  +  PNL
Sbjct: 548 QEKKIEMALNLWQQALDK-GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNL 606

Query: 436 ETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDE 615
            T N L++   + R+++KA E+ + + +  L PD+ SY   I GL     + +A++  ++
Sbjct: 607 VTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLND 666

Query: 616 MLERGLKPDVMCYNILI 666
            L RG+ P  + +NIL+
Sbjct: 667 ALNRGILPTAVTWNILV 683


>ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09060 gi|5923671|gb|AAD56322.1|AC009326_9
           hypothetical protein [Arabidopsis thaliana]
           gi|332641194|gb|AEE74715.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  339 bits (870), Expect = 4e-91
 Identities = 155/297 (52%), Positives = 223/297 (75%)
 Frame = +1

Query: 1   LTPKRLLHLLKSEKXXXXXXXXXXXXXXHPNYAHTPAVFHHILRRLSASKDPKLLPNITR 180
           L+PK +L LLKSEK              HP YAH+  V+HHILRRLS   + +++ +++R
Sbjct: 8   LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLS---ETRMVNHVSR 64

Query: 181 IVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAF 360
           IV+LIR Q+C C+ED AL+V+K Y +N M ++A++VF++M+E+FGCEP +RSYN+L+NAF
Sbjct: 65  IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124

Query: 361 VASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDV 540
           V + Q  K E     F    V+PNL+T+N+L+K++C+K+EF+KAR  ++ MW+    PDV
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184

Query: 541 YSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWER 720
           +SY T+IN LAK+G + +AL++FDEM ERG+ PDV CYNILIDGFLK+ D+     +W+R
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244

Query: 721 LTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
           L +DS VYP+V T+N++ISGL KCGR  + +++WERM++NER+ DLYTYS+LIHG+C
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301



 Score =  110 bits (276), Expect = 3e-22
 Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 1/209 (0%)
 Frame = +1

Query: 268 LERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKA-ELFLRNFRVMSVSPNLETF 444
           L+ A+E+F++M E  G  P V  YN L++ F+       A EL+ R     SV PN++T 
Sbjct: 200 LDDALELFDEMSER-GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH 258

Query: 445 NILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLE 624
           NI++    +    D   ++   M + +   D+Y+Y +LI+GL  +G+V +A  VF+E+ E
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318

Query: 625 RGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCGRFR 804
           R    DV+ YN ++ GF + G       +W  +   + V  ++V+YN+LI GL + G+  
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKID 376

Query: 805 EGVELWERMRKNERKMDLYTYSALIHGMC 891
           E   +W  M       D  TY   IHG+C
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLC 405



 Score =  102 bits (255), Expect = 9e-20
 Identities = 58/192 (30%), Positives = 98/192 (51%)
 Frame = +1

Query: 313  GCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNLETFNILLKIACRKREFDKA 492
            GC P V SYN L+     + +  +A  F++        P+L+T++ILL   CR R+ D A
Sbjct: 494  GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553

Query: 493  RELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEMLERGLKPDVMCYNILIDG 672
             EL +   +  L  DV  +  LI+GL   G + +A+ V   M  R    +++ YN L++G
Sbjct: 554  LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613

Query: 673  FLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKM 852
            F K GD +    IW  + K   + P +++YN ++ GLC C      +E ++  R +    
Sbjct: 614  FFKVGDSNRATVIWGYMYK-MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672

Query: 853  DLYTYSALIHGM 888
             +YT++ L+  +
Sbjct: 673  TVYTWNILVRAV 684



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 58/219 (26%), Positives = 107/219 (48%)
 Frame = +1

Query: 235  AVLKIYSRNQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRV 414
            +++    + + LE A  + ++M +  G E      N+L+   +  ++L +A  FLR    
Sbjct: 434  SIIDCLCKKKRLEEASNLVKEMSK-HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 415  MSVSPNLETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHE 594
                P + ++NIL+   C+  +F +A   +  M E    PD+ +Y  L+ GL +   +  
Sbjct: 493  NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552

Query: 595  ALKVFDEMLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLI 774
            AL+++ + L+ GL+ DVM +NILI G    G  D    +   +   +    ++VTYN L+
Sbjct: 553  ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT-ANLVTYNTLM 611

Query: 775  SGLCKCGRFREGVELWERMRKNERKMDLYTYSALIHGMC 891
             G  K G       +W  M K   + D+ +Y+ ++ G+C
Sbjct: 612  EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 58/306 (18%)
 Frame = +1

Query: 148  KDPKLLPNI-TRIVDLIRLQKCPCNEDTALAVLKIYSRNQMLERAMEVFEKMKEVFG-CE 321
            +D  + PN+ T  + +  L KC   +D     LKI+ R +  ER  +++     + G C+
Sbjct: 247  EDSSVYPNVKTHNIMISGLSKCGRVDDC----LKIWERMKQNEREKDLYTYSSLIHGLCD 302

Query: 322  PG--------------------VRSYNSLMNAFVASNQLSKAELFLRNFRVMSV--SPNL 435
             G                    V +YN+++  F    ++ ++   L  +R+M    S N+
Sbjct: 303  AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES---LELWRIMEHKNSVNI 359

Query: 436  ETFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDE 615
             ++NIL+K      + D+A  +  +M  +    D  +YG  I+GL  +G V++AL V  E
Sbjct: 360  VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419

Query: 616  MLERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTK---------------------- 729
            +   G   DV  Y  +ID   KK   +    + + ++K                      
Sbjct: 420  VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 730  ------------DSWVYPSVVTYNVLISGLCKCGRFREGVELWERMRKNERKMDLYTYSA 873
                         +   P+VV+YN+LI GLCK G+F E     + M +N  K DL TYS 
Sbjct: 480  LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539

Query: 874  LIHGMC 891
            L+ G+C
Sbjct: 540  LLCGLC 545



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 58/209 (27%), Positives = 95/209 (45%)
 Frame = +1

Query: 259  NQMLERAMEVFEKMKEVFGCEPGVRSYNSLMNAFVASNQLSKAELFLRNFRVMSVSPNLE 438
            N  + +A+ V +++ E  G    V +Y S+++      +L +A   ++      V  N  
Sbjct: 407  NGYVNKALGVMQEV-ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465

Query: 439  TFNILLKIACRKREFDKARELINVMWERDLVPDVYSYGTLINGLAKSGDVHEALKVFDEM 618
              N L+    R     +A   +  M +    P V SY  LI GL K+G   EA     EM
Sbjct: 466  VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525

Query: 619  LERGLKPDVMCYNILIDGFLKKGDYDAYKGIWERLTKDSWVYPSVVTYNVLISGLCKCGR 798
            LE G KPD+  Y+IL+ G  +    D    +W +  + S +   V+ +N+LI GLC  G+
Sbjct: 526  LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ-SGLETDVMMHNILIHGLCSVGK 584

Query: 799  FREGVELWERMRKNERKMDLYTYSALIHG 885
              + + +   M       +L TY+ L+ G
Sbjct: 585  LDDAMTVMANMEHRNCTANLVTYNTLMEG 613