BLASTX nr result

ID: Salvia21_contig00025234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00025234
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]    86   2e-15
ref|XP_002867333.1| pentatricopeptide repeat-containing protein ...    67   1e-09
ref|XP_002533229.1| pentatricopeptide repeat-containing protein,...    67   2e-09
ref|NP_194799.1| pentatricopeptide repeat-containing protein [Ar...    65   4e-09

>ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 804

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/96 (45%), Positives = 61/96 (63%)
 Frame = -2

Query: 296 IHGYSVKMGLIESQVAVATALVGVYSDWDMGSARKLFEQTPNRDXXXXXXXXXXXXSNGE 117
           I G  +K+G  ES+V+VATAL+G YSD+DMG   K+F QTP +D             +G+
Sbjct: 32  ICGSVIKLGF-ESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQ 90

Query: 116 YLESFKLLEEMLLSDVQPNHVTFSSVLPACAELGAL 9
           Y E+F++   M    V+PNHV+  S+LPACA +GAL
Sbjct: 91  YGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGAL 126


>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/96 (45%), Positives = 61/96 (63%)
 Frame = -2

Query: 296 IHGYSVKMGLIESQVAVATALVGVYSDWDMGSARKLFEQTPNRDXXXXXXXXXXXXSNGE 117
           I G  +K+G  ES+V+VATAL+G YSD+DMG   K+F QTP +D             +G+
Sbjct: 111 ICGSVIKLGF-ESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQ 169

Query: 116 YLESFKLLEEMLLSDVQPNHVTFSSVLPACAELGAL 9
           Y E+F++   M    V+PNHV+  S+LPACA +GAL
Sbjct: 170 YGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGAL 205


>ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313169|gb|EFH43592.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 792

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 LACGIHGYSVKMGLIESQVAVATALVGVYSDW-DMGSARKLFEQTPNRDXXXXXXXXXXX 132
           L   IHGYS+K   + S  +V+TAL  VYS   ++ SARKLF+++P +            
Sbjct: 337 LIYAIHGYSLKSNFL-SHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 131 XSNGEYLESFKLLEEMLLSDVQPNHVTFSSVLPACAELGALKM 3
             NG   ++  L  EM  S+  PN VT + +L ACA+LGAL +
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSL 438


>ref|XP_002533229.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526949|gb|EEF29150.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 575

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 IHGYSVKMGLIESQVAVATALVGVYSDW-DMGSARKLFEQTPNRDXXXXXXXXXXXXSNG 120
           IHG+ VK G++ S  +VATAL  VYS   +M +AR+LF+++  +              NG
Sbjct: 340 IHGFGVKSGIV-SHSSVATALTTVYSRLNEMEAARQLFDESSEKTLASWNAMIAGYTQNG 398

Query: 119 EYLESFKLLEEMLLSDVQPNHVTFSSVLPACAELGALKM 3
              ++  L +EM + ++ PN VT +S+L ACA+LGAL +
Sbjct: 399 ATEKAISLFQEMQMYNISPNPVTVTSILSACAQLGALTL 437


>ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
           gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis
           thaliana] gi|7269971|emb|CAB79788.1| putative protein
           [Arabidopsis thaliana] gi|332660398|gb|AEE85798.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 792

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 LACGIHGYSVKMGLIESQVAVATALVGVYSDW-DMGSARKLFEQTPNRDXXXXXXXXXXX 132
           L   IHGY +K   + S  +V+TAL  VYS   ++ SARKLF+++P +            
Sbjct: 337 LIYAIHGYCLKSNFL-SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 131 XSNGEYLESFKLLEEMLLSDVQPNHVTFSSVLPACAELGALKM 3
             NG   ++  L  EM  S+  PN VT + +L ACA+LGAL +
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438


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