BLASTX nr result

ID: Salvia21_contig00025085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00025085
         (1685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249...   337   4e-90
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   320   7e-85
gb|AAP40461.1| unknown protein [Arabidopsis thaliana]                 301   3e-79
ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein...   301   3e-79
ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra...   300   6e-79

>ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249946 [Vitis vinifera]
          Length = 414

 Score =  337 bits (865), Expect = 4e-90
 Identities = 190/332 (57%), Positives = 218/332 (65%), Gaps = 6/332 (1%)
 Frame = -1

Query: 1397 MLQSIPHQIVQSPARLGXXXXXXXXXXXXXXPKFLSQNPQTQQSHQPLNXXXXXXXXXXX 1218
            MLQS+ HQIVQSPARLG              PK  SQ PQ+QQ HQ  N           
Sbjct: 1    MLQSVQHQIVQSPARLGLPNPNSPSLQNSTAPKLSSQIPQSQQPHQQSNLSTTTTSSTLL 60

Query: 1217 XXXXXXXXXXXXXXXXXXXXXXXLFEVSPNRPHWISAFRGXXXXXXXXXXXXXXXXXXXX 1038
                                    FEVSPNR  W+++FRG                    
Sbjct: 61   SLLPPLSRAQSLLLQMASLASRL-FEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEH 119

Query: 1037 XXXXAKEIIAQFTTLQSQLFEAVAELQEILDLQDAKQKLTRDIRSKDVSLLAFANKLKET 858
                 KEI++ FT+LQ+QLFEAVAELQEILDLQDAKQK+TR+IRSKD ++LAFANKLKE 
Sbjct: 120  SPSSTKEILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEA 179

Query: 857  EHVLDMLVDDYSDYRRPKRTKSVDDADNSSK--TTVETQLKLSDILSYAHKISYTTFAPP 684
            E VLD+LVDDYSDYRRPKR+ + DD+++SS   TTV +QL LSDILSYAH+ISYTTFAPP
Sbjct: 180  EAVLDILVDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPP 239

Query: 683  EFGAGQAPLRGALPPAPQDEQMRASQLYNFADLDIGLPKTDEGKEKIIESLIETPAAPPA 504
            EFGAGQAPLRGALPPAPQ+EQMRASQLYNF+DLD+GLPK    KEK IE+ IE P A PA
Sbjct: 240  EFGAGQAPLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPA 299

Query: 503  ESNPLASLSAITSTL----VAPPGWKPGMPVE 420
            +SNPLA+L +I   L      P GWKPGMPVE
Sbjct: 300  DSNPLANLPSIQGLLPPNITVPSGWKPGMPVE 331


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  320 bits (820), Expect = 7e-85
 Identities = 181/322 (56%), Positives = 209/322 (64%), Gaps = 6/322 (1%)
 Frame = -1

Query: 1367 QSPARLGXXXXXXXXXXXXXXPKFLSQNPQTQQSHQPLNXXXXXXXXXXXXXXXXXXXXX 1188
            +SPARLG              PK  SQ PQ+QQ HQ  N                     
Sbjct: 1045 KSPARLGLPNPNSPSLQNSTAPKLSSQIPQSQQPHQQSNLSTTTTSSTLLSLLPPLSRAQ 1104

Query: 1187 XXXXXXXXXXXXXLFEVSPNRPHWISAFRGXXXXXXXXXXXXXXXXXXXXXXXXAKEIIA 1008
                          FEVSPNR  W+++FRG                         KEI++
Sbjct: 1105 SLLLQMASLASRL-FEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTKEILS 1163

Query: 1007 QFTTLQSQLFEAVAELQEILDLQDAKQKLTRDIRSKDVSLLAFANKLKETEHVLDMLVDD 828
             FT+LQ+QLFEAVAELQEILDLQDAKQK+TR+IRSKD ++LAFANKLKE E VLD+LVDD
Sbjct: 1164 LFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEAEAVLDILVDD 1223

Query: 827  YSDYRRPKRTKSVDDADNSSK--TTVETQLKLSDILSYAHKISYTTFAPPEFGAGQAPLR 654
            YSDYRRPKR+ + DD+++SS   TTV +QL LSDILSYAH+ISYTTFAPPEFGAGQAPLR
Sbjct: 1224 YSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPPEFGAGQAPLR 1283

Query: 653  GALPPAPQDEQMRASQLYNFADLDIGLPKTDEGKEKIIESLIETPAAPPAESNPLASLSA 474
            GALPPAPQ+EQMRASQLYNF+DLD+GLPK    KEK IE+ IE P A PA+SNPLA+L +
Sbjct: 1284 GALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPLANLPS 1343

Query: 473  ITSTL----VAPPGWKPGMPVE 420
            I   L      P GWKPGMPVE
Sbjct: 1344 IQGLLPPNITVPSGWKPGMPVE 1365


>gb|AAP40461.1| unknown protein [Arabidopsis thaliana]
          Length = 426

 Score =  301 bits (772), Expect = 3e-79
 Identities = 161/249 (64%), Positives = 185/249 (74%), Gaps = 7/249 (2%)
 Frame = -1

Query: 1145 FEVSPNRPHWISAFRGXXXXXXXXXXXXXXXXXXXXXXXXAKEIIAQFTTLQSQLFEAVA 966
            F+VSPNR  W+SAFRG                         KEI++QF +LQ+QLFEAV 
Sbjct: 101  FDVSPNRAIWLSAFRGSLPSFLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVT 160

Query: 965  ELQEILDLQDAKQKLTRDIRSKDVSLLAFANKLKETEHVLDMLVDDYSDYRRPKRTK-SV 789
            ELQEILDLQDAKQK+ R+I+SKD SLLAFANKLK+ E VLDMLVDDYSDYR+PKR+K   
Sbjct: 161  ELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEE 220

Query: 788  DDADN-----SSKTTVETQLKLSDILSYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE 624
            DD DN     SS TTV +QLKL DIL+YAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE
Sbjct: 221  DDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE 280

Query: 623  QMRASQLYNFADLDIGLPKTDEGKEKIIESLIETPAAPPAESNPLASL-SAITSTLVAPP 447
            QMRASQLY FADLDIGLPKT E  EK +E+LIE P  PP E+  ++++ + +   +  P 
Sbjct: 281  QMRASQLYTFADLDIGLPKTVENMEKKVEALIEPP--PPPEAMDISAIHNLLPPNIAVPS 338

Query: 446  GWKPGMPVE 420
            GWKPGMPVE
Sbjct: 339  GWKPGMPVE 347


>ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
            thaliana] gi|75181168|sp|Q9LZ00.1|MED4_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            4 gi|7413560|emb|CAB86039.1| putative protein
            [Arabidopsis thaliana] gi|332003144|gb|AED90527.1|
            hydroxyproline-rich glycoprotein family protein
            [Arabidopsis thaliana]
          Length = 426

 Score =  301 bits (772), Expect = 3e-79
 Identities = 161/249 (64%), Positives = 185/249 (74%), Gaps = 7/249 (2%)
 Frame = -1

Query: 1145 FEVSPNRPHWISAFRGXXXXXXXXXXXXXXXXXXXXXXXXAKEIIAQFTTLQSQLFEAVA 966
            F+VSPNR  W+SAFRG                         KEI++QF +LQ+QLFEAV 
Sbjct: 101  FDVSPNRAIWLSAFRGSLPSFLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVT 160

Query: 965  ELQEILDLQDAKQKLTRDIRSKDVSLLAFANKLKETEHVLDMLVDDYSDYRRPKRTK-SV 789
            ELQEILDLQDAKQK+ R+I+SKD SLLAFANKLK+ E VLDMLVDDYSDYR+PKR+K   
Sbjct: 161  ELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEE 220

Query: 788  DDADN-----SSKTTVETQLKLSDILSYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE 624
            DD DN     SS TTV +QLKL DIL+YAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE
Sbjct: 221  DDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE 280

Query: 623  QMRASQLYNFADLDIGLPKTDEGKEKIIESLIETPAAPPAESNPLASL-SAITSTLVAPP 447
            QMRASQLY FADLDIGLPKT E  EK +E+LIE P  PP E+  ++++ + +   +  P 
Sbjct: 281  QMRASQLYTFADLDIGLPKTVENMEKKVEALIEPP--PPPEAMDISAIHNLLPPNIAVPS 338

Query: 446  GWKPGMPVE 420
            GWKPGMPVE
Sbjct: 339  GWKPGMPVE 347


>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            [Cucumis sativus] gi|449520010|ref|XP_004167027.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4-like [Cucumis sativus]
          Length = 404

 Score =  300 bits (769), Expect = 6e-79
 Identities = 172/326 (52%), Positives = 204/326 (62%), Gaps = 4/326 (1%)
 Frame = -1

Query: 1385 IPHQIVQSPARLGXXXXXXXXXXXXXXPKFLSQNPQTQQSH-QPLNXXXXXXXXXXXXXX 1209
            + HQIVQSPARLG              PK     P +QQSH Q  +              
Sbjct: 2    LQHQIVQSPARLGLTNPNSPSIQNPTPPKL----PPSQQSHHQNQSNLSSSTPSSTLLPL 57

Query: 1208 XXXXXXXXXXXXXXXXXXXXLFEVSPNRPHWISAFRGXXXXXXXXXXXXXXXXXXXXXXX 1029
                                LFEVSPNR  W++AFRG                       
Sbjct: 58   LPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPS 117

Query: 1028 XAKEIIAQFTTLQSQLFEAVAELQEILDLQDAKQKLTRDIRSKDVSLLAFANKLKETEHV 849
             +KEI++ F  LQ+QLFEAVAELQEILDLQD+KQK+  +IR+KD +L AFANKLKE E V
Sbjct: 118  SSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQV 177

Query: 848  LDMLVDDYSDYRRPKRTKSVDDADNSS--KTTVETQLKLSDILSYAHKISYTTFAPPEFG 675
            LD+L DDY+DY+RP+R K+  DA+N S   TTV +QL+LSDILSYAH+ISYTTFAPPEFG
Sbjct: 178  LDVLFDDYADYQRPRRDKTEGDAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFG 237

Query: 674  AGQAPLRGALPPAPQDEQMRASQLYNFADLDIGLPKTDEGKEKIIESLIETPAAPPAESN 495
            AGQAPLRGALPPAPQDEQMRASQLYNFA+LD+GLPK  E  EK IE +IE PA    ++N
Sbjct: 238  AGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDAN 297

Query: 494  PLASLSA-ITSTLVAPPGWKPGMPVE 420
            PLA++   +   +  P GWKPGMPVE
Sbjct: 298  PLAAIQGLLPPNITVPSGWKPGMPVE 323


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