BLASTX nr result
ID: Salvia21_contig00024639
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00024639
(940 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27634.3| unnamed protein product [Vitis vinifera] 191 2e-46
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi... 191 2e-46
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi... 189 8e-46
ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ... 189 8e-46
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi... 189 1e-45
>emb|CBI27634.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 191 bits (486), Expect = 2e-46
Identities = 94/122 (77%), Positives = 108/122 (88%)
Frame = -1
Query: 367 RGDGEMGRADLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGIN 188
+G G+MGRADLA AVLD L +GGYLDIVMYNTLINALGKAGR EA +LF+QM+SSGIN
Sbjct: 226 QGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGIN 285
Query: 187 PDVFTYNTLIEVHSKAGRLKEAYEFLKMMLDAGCAPNHVTDTCLDFLEKEIERRRYDKAS 8
PDV T+NTLIE+H+KAG+LK AY+FLK+MLDAGC+PNHVTDT LDFL KEIE+ RY KAS
Sbjct: 286 PDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAGCSPNHVTDTTLDFLGKEIEKLRYKKAS 345
Query: 7 II 2
II
Sbjct: 346 II 347
Score = 149 bits (377), Expect(2) = 2e-38
Identities = 71/91 (78%), Positives = 82/91 (90%)
Frame = +1
Query: 424 DLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINPDVFTYNTL 603
DLA AVLD L +GGYLDIVMYNTLINALGKAGR EA +LF+QM+SSGINPDV T+NTL
Sbjct: 235 DLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTL 294
Query: 604 IEVHSKAGRLKEAYEFLKMMLDAGCAPNHVT 696
IE+H+KAG+LK AY+FLK+MLDAGC+PNHVT
Sbjct: 295 IEIHAKAGQLKAAYKFLKLMLDAGCSPNHVT 325
Score = 36.2 bits (82), Expect(2) = 2e-38
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 GVDQGVVHDNVEVPAFIVQLVENSL-GEIRPPHLPVTPSDIATYNVVIQGLGMIG 418
GVD + N + AF+ + N G V P DIATYNV+IQGLG +G
Sbjct: 178 GVDPVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEKVCPPDIATYNVIIQGLGKMG 232
>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 191 bits (486), Expect = 2e-46
Identities = 94/122 (77%), Positives = 108/122 (88%)
Frame = -1
Query: 367 RGDGEMGRADLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGIN 188
+G G+MGRADLA AVLD L +GGYLDIVMYNTLINALGKAGR EA +LF+QM+SSGIN
Sbjct: 663 QGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGIN 722
Query: 187 PDVFTYNTLIEVHSKAGRLKEAYEFLKMMLDAGCAPNHVTDTCLDFLEKEIERRRYDKAS 8
PDV T+NTLIE+H+KAG+LK AY+FLK+MLDAGC+PNHVTDT LDFL KEIE+ RY KAS
Sbjct: 723 PDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAGCSPNHVTDTTLDFLGKEIEKLRYKKAS 782
Query: 7 II 2
II
Sbjct: 783 II 784
Score = 149 bits (377), Expect(2) = 2e-38
Identities = 71/91 (78%), Positives = 82/91 (90%)
Frame = +1
Query: 424 DLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINPDVFTYNTL 603
DLA AVLD L +GGYLDIVMYNTLINALGKAGR EA +LF+QM+SSGINPDV T+NTL
Sbjct: 672 DLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTL 731
Query: 604 IEVHSKAGRLKEAYEFLKMMLDAGCAPNHVT 696
IE+H+KAG+LK AY+FLK+MLDAGC+PNHVT
Sbjct: 732 IEIHAKAGQLKAAYKFLKLMLDAGCSPNHVT 762
Score = 36.2 bits (82), Expect(2) = 2e-38
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 GVDQGVVHDNVEVPAFIVQLVENSL-GEIRPPHLPVTPSDIATYNVVIQGLGMIG 418
GVD + N + AF+ + N G V P DIATYNV+IQGLG +G
Sbjct: 615 GVDPVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEKVCPPDIATYNVIIQGLGKMG 669
Score = 58.2 bits (139), Expect = 3e-06
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Frame = -1
Query: 358 GEMGRA-DLAKAVLDK-LNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINP 185
G++G A +L K + DK LN D+ YN+LI L G+ +A+ +++++K SG P
Sbjct: 246 GDLGTALNLFKEMKDKSLNSSSFGPDLCTYNSLIRVLCLVGKVKDALIVWEELKGSGHEP 305
Query: 184 DVFTYNTLIEVHSKAGRLKEAYE-FLKMMLDAGCAPNHVTDTCLDFLEK 41
D FTY LI+ SK+ R+ +A F +M + C V +T LD L K
Sbjct: 306 DAFTYRILIQGCSKSYRMDDAMRIFNEMQYNGFCPDTIVYNTLLDGLFK 354
>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Cucumis sativus] gi|449523383|ref|XP_004168703.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 189 bits (480), Expect = 8e-46
Identities = 91/122 (74%), Positives = 110/122 (90%)
Frame = -1
Query: 367 RGDGEMGRADLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGIN 188
+G G+MGRADLA +VL+KL ++GGYLDIVMYNTLINALGKAGR + +LF QM++SGIN
Sbjct: 676 QGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGIN 735
Query: 187 PDVFTYNTLIEVHSKAGRLKEAYEFLKMMLDAGCAPNHVTDTCLDFLEKEIERRRYDKAS 8
PDV T+NTLIEVHSKAGRLK+AY+FLKMMLD+GC+PNHVTDT LDFL +E+E+ RY+KAS
Sbjct: 736 PDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREMEKARYEKAS 795
Query: 7 II 2
II
Sbjct: 796 II 797
Score = 148 bits (373), Expect(2) = 9e-38
Identities = 70/91 (76%), Positives = 83/91 (91%)
Frame = +1
Query: 424 DLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINPDVFTYNTL 603
DLA +VL+KL ++GGYLDIVMYNTLINALGKAGR + +LF QM++SGINPDV T+NTL
Sbjct: 685 DLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTL 744
Query: 604 IEVHSKAGRLKEAYEFLKMMLDAGCAPNHVT 696
IEVHSKAGRLK+AY+FLKMMLD+GC+PNHVT
Sbjct: 745 IEVHSKAGRLKDAYKFLKMMLDSGCSPNHVT 775
Score = 35.8 bits (81), Expect(2) = 9e-38
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 359 VTPSDIATYNVVIQGLGMIG 418
V P+DIATYNV+IQGLG +G
Sbjct: 663 VCPADIATYNVIIQGLGKMG 682
>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
[Medicago truncatula] gi|355496560|gb|AES77763.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 791
Score = 189 bits (480), Expect = 8e-46
Identities = 92/122 (75%), Positives = 106/122 (86%)
Frame = -1
Query: 367 RGDGEMGRADLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGIN 188
+G G+MGRADLA AVLD L +GGYLDIVMYNTLINALGKAGR E + F+QMKSSGIN
Sbjct: 663 QGLGKMGRADLASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGIN 722
Query: 187 PDVFTYNTLIEVHSKAGRLKEAYEFLKMMLDAGCAPNHVTDTCLDFLEKEIERRRYDKAS 8
PDV TYNTLIE+HSKAGRLK+AY+FLKMM+DAGC PNHVTDT LD+L +EI++ RY KAS
Sbjct: 723 PDVVTYNTLIEIHSKAGRLKDAYKFLKMMIDAGCTPNHVTDTTLDYLVREIDKLRYQKAS 782
Query: 7 II 2
I+
Sbjct: 783 IL 784
Score = 151 bits (381), Expect(2) = 5e-38
Identities = 73/91 (80%), Positives = 80/91 (87%)
Frame = +1
Query: 424 DLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINPDVFTYNTL 603
DLA AVLD L +GGYLDIVMYNTLINALGKAGR E + F+QMKSSGINPDV TYNTL
Sbjct: 672 DLASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTL 731
Query: 604 IEVHSKAGRLKEAYEFLKMMLDAGCAPNHVT 696
IE+HSKAGRLK+AY+FLKMM+DAGC PNHVT
Sbjct: 732 IEIHSKAGRLKDAYKFLKMMIDAGCTPNHVT 762
Score = 33.5 bits (75), Expect(2) = 5e-38
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 365 PSDIATYNVVIQGLGMIG 418
P+DIATYN++IQGLG +G
Sbjct: 652 PTDIATYNMIIQGLGKMG 669
>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Glycine max]
Length = 768
Score = 189 bits (479), Expect = 1e-45
Identities = 92/122 (75%), Positives = 108/122 (88%)
Frame = -1
Query: 367 RGDGEMGRADLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGIN 188
+G G+MGRADLA AVLD+L +GGYLDIVMYNTLINALGKA R E +LF+QM+SSGIN
Sbjct: 640 QGLGKMGRADLASAVLDRLLRQGGYLDIVMYNTLINALGKASRIDEVNKLFEQMRSSGIN 699
Query: 187 PDVFTYNTLIEVHSKAGRLKEAYEFLKMMLDAGCAPNHVTDTCLDFLEKEIERRRYDKAS 8
PDV TYNTLIEVHSKAGRLK+AY+FLKMMLDAGC+PNHVTDT LD+L +EI++ RY +AS
Sbjct: 700 PDVVTYNTLIEVHSKAGRLKDAYKFLKMMLDAGCSPNHVTDTTLDYLGREIDKLRYQRAS 759
Query: 7 II 2
I+
Sbjct: 760 IL 761
Score = 152 bits (383), Expect(2) = 3e-38
Identities = 74/91 (81%), Positives = 82/91 (90%)
Frame = +1
Query: 424 DLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINPDVFTYNTL 603
DLA AVLD+L +GGYLDIVMYNTLINALGKA R E +LF+QM+SSGINPDV TYNTL
Sbjct: 649 DLASAVLDRLLRQGGYLDIVMYNTLINALGKASRIDEVNKLFEQMRSSGINPDVVTYNTL 708
Query: 604 IEVHSKAGRLKEAYEFLKMMLDAGCAPNHVT 696
IEVHSKAGRLK+AY+FLKMMLDAGC+PNHVT
Sbjct: 709 IEVHSKAGRLKDAYKFLKMMLDAGCSPNHVT 739
Score = 33.5 bits (75), Expect(2) = 3e-38
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 365 PSDIATYNVVIQGLGMIG 418
P+DIATYN++IQGLG +G
Sbjct: 629 PTDIATYNMIIQGLGKMG 646
Score = 65.5 bits (158), Expect = 2e-08
Identities = 32/92 (34%), Positives = 50/92 (54%)
Frame = -1
Query: 352 MGRADLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINPDVFT 173
+G+ D A V ++LN D Y LI A K R +A+ +F QM+S+G PD
Sbjct: 263 LGKVDDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRMEDAIRIFNQMQSNGFRPDTLA 322
Query: 172 YNTLIEVHSKAGRLKEAYEFLKMMLDAGCAPN 77
YN+L++ H KA ++ EA + + M+ G P+
Sbjct: 323 YNSLLDGHFKATKVMEACQLFEKMVQEGVRPS 354
Score = 63.2 bits (152), Expect = 9e-08
Identities = 32/89 (35%), Positives = 48/89 (53%)
Frame = +1
Query: 421 VDLAKAVLDKLNDEGGYLDIVMYNTLINALGKAGRFGEAVELFQQMKSSGINPDVFTYNT 600
VD A V ++LN D Y LI A K R +A+ +F QM+S+G PD YN+
Sbjct: 266 VDDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRMEDAIRIFNQMQSNGFRPDTLAYNS 325
Query: 601 LIEVHSKAGRLKEAYEFLKMMLDAGCAPN 687
L++ H KA ++ EA + + M+ G P+
Sbjct: 326 LLDGHFKATKVMEACQLFEKMVQEGVRPS 354