BLASTX nr result

ID: Salvia21_contig00024481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00024481
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_002532091.1| pentatricopeptide repeat-containing protein,...   114   8e-24
ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21

>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KIVELKDFSYSTLLFPQIPI-NTYAFNVMIRGLATSWGKFDSALELFVEMKSSGARPDNF 179
           + ++LKDF+ ++LLF QIP  N YAFN+MIRGL T+W KF+  +E + +MK  G RP+NF
Sbjct: 68  RFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNF 127

Query: 180 TYPFVSISCGSLEALGIGKSVHCEVCKSGLLVDFHVANSLITMYS 314
           TYPFV I+C +L  L  G+  H  V KSGL  D HV +SLITMYS
Sbjct: 128 TYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYS 172


>ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528238|gb|EEF30293.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/105 (52%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KIVELKDFSYSTLLFPQIPI-NTYAFNVMIRGLATSWGKFDSALELFVEMKSSGARPDNF 179
           +I++LKDF+Y++LLF Q+P  N YAFNVMIRGL T+W  +  A++L+ +MKS G +P+NF
Sbjct: 69  RIIDLKDFAYASLLFTQMPNPNDYAFNVMIRGLTTTWRNYSLAIQLYYQMKSLGLKPNNF 128

Query: 180 TYPFVSISCGSLEALGIGKSVHCEVCKSGLLVDFHVANSLITMYS 314
           T+PF+ ISC +L AL  G+  H  V K G   D H+ +SLITMY+
Sbjct: 129 TFPFLFISCANLVALHCGQIAHSLVLKMGFNNDSHINHSLITMYA 173


>ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|222858845|gb|EEE96392.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/105 (52%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KIVELKDFSYSTLLFPQIPI-NTYAFNVMIRGLATSWGKFDSALELFVEMKSSGARPDNF 179
           KI++LKD +Y++L+F Q+   N YAFNVM+RGLAT+W K+D  +EL+ ++KS G + +NF
Sbjct: 70  KIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNF 129

Query: 180 TYPFVSISCGSLEALGIGKSVHCEVCKSGLLVDFHVANSLITMYS 314
           TYPF+ I+CG++  L  GK  HC V K+GL  D +V +SLITMY+
Sbjct: 130 TYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYA 174


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/105 (50%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KIVELKDFSYSTLLFPQIPINT-YAFNVMIRGLATSWGKFDSALELFVEMKSSGARPDNF 179
           KI +LKDF+Y+++ F  I   T Y+FNVMIRGL+T+W K   ALE +  MK  G +P+N 
Sbjct: 69  KIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNL 128

Query: 180 TYPFVSISCGSLEALGIGKSVHCEVCKSGLLVDFHVANSLITMYS 314
           TYPF+ I+C +L A+  G+  HC V + GL  D HV++SLITMY+
Sbjct: 129 TYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYA 173


>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/105 (50%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KIVELKDFSYSTLLFPQIPINT-YAFNVMIRGLATSWGKFDSALELFVEMKSSGARPDNF 179
           KI +LKDF+Y+++ F  I   T Y+FNVMIRGL+T+W K   ALE +  MK  G +P+N 
Sbjct: 69  KIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNL 128

Query: 180 TYPFVSISCGSLEALGIGKSVHCEVCKSGLLVDFHVANSLITMYS 314
           TYPF+ I+C +L A+  G+  HC V + GL  D HV++SLITMY+
Sbjct: 129 TYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYA 173


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