BLASTX nr result

ID: Salvia21_contig00024341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00024341
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...    65   8e-09
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...    60   2e-07
emb|CBI36896.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/83 (40%), Positives = 45/83 (54%)
 Frame = +3

Query: 78   FLRHFEDNRNDADDKNHAEEADSEGSKKVPNXXXXXXXXXXXXXXXASRDKFSNPTSDAL 257
            FL+HFE +  D++       + S GS K+ +                SR +FSN TSD L
Sbjct: 819  FLKHFEGSHTDSNGSEQDGRSSSLGSNKILDKQEKIKIKKLRETTKLSRARFSNSTSDTL 878

Query: 258  TVAFALQSFDLSECPTEFCYENA 326
            TVA+AL  F+LS  P EFC+ENA
Sbjct: 879  TVAYALHCFELSTSPVEFCHENA 901


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/83 (40%), Positives = 46/83 (55%)
 Frame = +3

Query: 75   PFLRHFEDNRNDADDKNHAEEADSEGSKKVPNXXXXXXXXXXXXXXXASRDKFSNPTSDA 254
            PF+  FE N    D  +  E+A++  + ++ +                SR KFSNP+SDA
Sbjct: 1010 PFVMQFEGNHTRNDGLDQVEKANTPVTDEIVDKQDKLKKKKLKETAKVSRAKFSNPSSDA 1069

Query: 255  LTVAFALQSFDLSECPTEFCYEN 323
            LTVA+ALQ F+LS  P EFC EN
Sbjct: 1070 LTVAYALQCFELSGSPVEFCNEN 1092


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 868

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = +3

Query: 75  PFLRHFEDNRNDADDKNHAEEADSEGSKKVPNXXXXXXXXXXXXXXXASRDKFSNPTSDA 254
           PFL  FE +++D +  +    + +  +KK  +                SR+KFSN TSDA
Sbjct: 476 PFLIQFEGSQDDNNVLDQDGGSGTLDNKKNLDKQEKLRKKKLKETLKVSREKFSNLTSDA 535

Query: 255 LTVAFALQSFDLSECPTEFCYENA 326
           LT+A+ALQ F+LS  P EFC ENA
Sbjct: 536 LTIAYALQCFELSNSPVEFCSENA 559


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 219 SRDKFSNPTSDALTVAFALQSFDLSECPTEFCYEN 323
           SR KFSNP+SDALTVA+ALQ F+LS  P EFC EN
Sbjct: 797 SRAKFSNPSSDALTVAYALQCFELSGSPVEFCNEN 831


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