BLASTX nr result

ID: Salvia21_contig00024153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00024153
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [C...   181   3e-43
ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [C...   180   3e-43
ref|NP_181476.2| ribonuclease H2 subunit C [Arabidopsis thaliana...   176   5e-42
ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15...   176   8e-42
gb|AFK40297.1| unknown [Lotus japonicus]                              174   2e-41

>ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 164

 Score =  181 bits (458), Expect = 3e-43
 Identities = 85/133 (63%), Positives = 100/133 (75%)
 Frame = +3

Query: 156 AADLTGKVHQLPCCIKHDGPTPVSHYFKPKPTEMELDGLKVEEAHFRGRKLHGTTVSLPR 335
           A D++GKVHQLPC IK DGP PVSHYFKPK T +E+DGL +EEA+FRGRKL G T+SLP 
Sbjct: 25  ALDISGKVHQLPCTIKFDGPCPVSHYFKPKSTGIEVDGLNLEEAYFRGRKLQGATISLPE 84

Query: 336 GYSGYILRKRGHDQWNNDTDLHCWETAATFQDITVWNHDAIPSKDDAFLRTFHWFTVANA 515
           GYSGY+L K+     + D D   W+  A F +IT WNHD +PS+DD F RTFHW TVA A
Sbjct: 85  GYSGYVLGKKSKASKHCD-DSSPWQVKAKFDNITYWNHDTLPSQDDTFQRTFHWLTVAQA 143

Query: 516 LHQTVTAEDLESA 554
           LH+ VTAEDL SA
Sbjct: 144 LHKPVTAEDLASA 156


>ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 169

 Score =  180 bits (457), Expect = 3e-43
 Identities = 85/133 (63%), Positives = 99/133 (74%)
 Frame = +3

Query: 156 AADLTGKVHQLPCCIKHDGPTPVSHYFKPKPTEMELDGLKVEEAHFRGRKLHGTTVSLPR 335
           A D++GKVHQLPC IK DGP PVSHYFKPK T +E+DGL +EEA+FRGRKL G T+SLP 
Sbjct: 30  ALDISGKVHQLPCTIKFDGPCPVSHYFKPKSTGIEVDGLNLEEAYFRGRKLQGATISLPE 89

Query: 336 GYSGYILRKRGHDQWNNDTDLHCWETAATFQDITVWNHDAIPSKDDAFLRTFHWFTVANA 515
           GYSGY+L K+       D D   W+  A F +IT WNHD +PS+DD F RTFHW TVA A
Sbjct: 90  GYSGYVLGKKSKASEQCD-DSSPWQVKAKFDNITYWNHDTLPSQDDTFQRTFHWLTVAQA 148

Query: 516 LHQTVTAEDLESA 554
           LH+ VTAEDL SA
Sbjct: 149 LHKPVTAEDLASA 161


>ref|NP_181476.2| ribonuclease H2 subunit C [Arabidopsis thaliana]
           gi|330254583|gb|AEC09677.1| ribonuclease H2 subunit C
           [Arabidopsis thaliana]
          Length = 162

 Score =  176 bits (447), Expect = 5e-42
 Identities = 78/138 (56%), Positives = 99/138 (71%), Gaps = 7/138 (5%)
 Frame = +3

Query: 153 SAADLTGKVHQLPCCIKHDGPTPVSHYFKPKPTEMELDGLKVEEAHFRGRKLHGTTVSLP 332
           S  DL+ +VHQLPCCI+ DGP  VSHYFKPK +++E+DG+K EEAHFRGRKL G T+SLP
Sbjct: 14  SIVDLSSQVHQLPCCIRFDGPVEVSHYFKPKSSDVEIDGVKTEEAHFRGRKLQGATISLP 73

Query: 333 RGYSGYILRKRGHDQWNN-------DTDLHCWETAATFQDITVWNHDAIPSKDDAFLRTF 491
            GYSG++LR+  +   N          D  CWE  A F ++T WNHD++PSKDD F R+F
Sbjct: 74  SGYSGFVLRQASNLNANGKRKASMPTEDNQCWEVKAKFNNLTYWNHDSLPSKDDTFFRSF 133

Query: 492 HWFTVANALHQTVTAEDL 545
           HWF++A ALH+ V  EDL
Sbjct: 134 HWFSIAEALHKPVKVEDL 151


>ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15c [Vitis vinifera]
           gi|297737975|emb|CBI27176.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  176 bits (445), Expect = 8e-42
 Identities = 82/163 (50%), Positives = 113/163 (69%), Gaps = 4/163 (2%)
 Frame = +3

Query: 84  MDGKDEGSSDSAAPVAVHLSKGCSAADLTGKVHQLPCCIKHDGPTPVSHYFKPKPTEMEL 263
           MD  +E  ++  +   + L  G +  DLTG +HQLPCCIK++GP  VSHYFKPK T +E+
Sbjct: 1   MDAIEERVAEKESGGCIDLCLGEAVVDLTGHIHQLPCCIKYNGPCSVSHYFKPKHTGIEV 60

Query: 264 DGLKVEEAHFRGRKLHGTTVSLPRGYSGYILRKRGHD----QWNNDTDLHCWETAATFQD 431
           +GLKVEEA FRGRKL GTT+ LP GYSG++L K+  +       ++ +++ WET A FQ 
Sbjct: 61  EGLKVEEAFFRGRKLQGTTIHLPEGYSGFVLGKKSSNTTKSTGTSEGNMNRWETNAKFQA 120

Query: 432 ITVWNHDAIPSKDDAFLRTFHWFTVANALHQTVTAEDLESACI 560
           IT WNHD +PS+DD+++R+FHW  V+ ALH+   AEDL  A +
Sbjct: 121 ITFWNHDNLPSQDDSYVRSFHWLAVSKALHKPAMAEDLRVASL 163


>gb|AFK40297.1| unknown [Lotus japonicus]
          Length = 150

 Score =  174 bits (441), Expect = 2e-41
 Identities = 80/133 (60%), Positives = 97/133 (72%)
 Frame = +3

Query: 162 DLTGKVHQLPCCIKHDGPTPVSHYFKPKPTEMELDGLKVEEAHFRGRKLHGTTVSLPRGY 341
           DLT +VHQLPCC+KHDG  PVSHYFKPKPT +  +GL ++EAHFRGR L GTT+ LP GY
Sbjct: 17  DLTDRVHQLPCCVKHDGSAPVSHYFKPKPTGVGDEGLPLQEAHFRGRLLQGTTLQLPHGY 76

Query: 342 SGYILRKRGHDQWNNDTDLHCWETAATFQDITVWNHDAIPSKDDAFLRTFHWFTVANALH 521
           SG++L K+       ++  H WET A F +IT WNHD +PS++D F R FHW TVANALH
Sbjct: 77  SGFVLGKKTSPHAEEESS-HSWETYAKFDNITYWNHDYLPSQNDDFSRAFHWLTVANALH 135

Query: 522 QTVTAEDLESACI 560
             VT E+L SA I
Sbjct: 136 NPVTPEELASASI 148


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